Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE7Q9UBL6 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE7Q9UBL6 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.63■□□□□ 0.41
CPNE7Q9UBL6 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.63■□□□□ 0.41
CPNE7Q9UBL6 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.63■□□□□ 0.41
CPNE7Q9UBL6 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CPNE7Q9UBL6 AC246785.2-201ENST00000432512 513 ntBASIC17.63■□□□□ 0.41
CPNE7Q9UBL6 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.63■□□□□ 0.41
CPNE7Q9UBL6 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.63■□□□□ 0.41
CPNE7Q9UBL6 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.63■□□□□ 0.41
CPNE7Q9UBL6 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.63■□□□□ 0.41
CPNE7Q9UBL6 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.63■□□□□ 0.41
CPNE7Q9UBL6 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.63■□□□□ 0.41
CPNE7Q9UBL6 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.63■□□□□ 0.41
CPNE7Q9UBL6 AL121894.2-201ENST00000602977 491 ntBASIC17.63■□□□□ 0.41
CPNE7Q9UBL6 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.63■□□□□ 0.41
CPNE7Q9UBL6 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE7Q9UBL6 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE7Q9UBL6 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE7Q9UBL6 LINC00602-201ENST00000629776 2065 ntBASIC17.63■□□□□ 0.41
CPNE7Q9UBL6 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE7Q9UBL6 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE7Q9UBL6 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE7Q9UBL6 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.63■□□□□ 0.41
CPNE7Q9UBL6 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.63■□□□□ 0.41
CPNE7Q9UBL6 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE7Q9UBL6 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE7Q9UBL6 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE7Q9UBL6 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.63■□□□□ 0.41
CPNE7Q9UBL6 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE7Q9UBL6 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE7Q9UBL6 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE7Q9UBL6 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE7Q9UBL6 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE7Q9UBL6 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE7Q9UBL6 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE7Q9UBL6 BX323043.1-201ENST00000641006 1765 ntBASIC17.62■□□□□ 0.41
CPNE7Q9UBL6 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE7Q9UBL6 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE7Q9UBL6 AL845331.1-201ENST00000424978 1190 ntBASIC17.62■□□□□ 0.41
CPNE7Q9UBL6 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE7Q9UBL6 FOSL1P1-201ENST00000511041 816 ntBASIC17.62■□□□□ 0.41
CPNE7Q9UBL6 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.62■□□□□ 0.41
CPNE7Q9UBL6 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.62■□□□□ 0.41
CPNE7Q9UBL6 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.62■□□□□ 0.41
CPNE7Q9UBL6 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.62■□□□□ 0.41
CPNE7Q9UBL6 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.62■□□□□ 0.41
CPNE7Q9UBL6 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE7Q9UBL6 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE7Q9UBL6 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE7Q9UBL6 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE7Q9UBL6 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE7Q9UBL6 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE7Q9UBL6 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE7Q9UBL6 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE7Q9UBL6 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE7Q9UBL6 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPNE7Q9UBL6 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CPNE7Q9UBL6 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.61■□□□□ 0.41
CPNE7Q9UBL6 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPNE7Q9UBL6 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPNE7Q9UBL6 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPNE7Q9UBL6 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPNE7Q9UBL6 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPNE7Q9UBL6 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
CPNE7Q9UBL6 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPNE7Q9UBL6 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPNE7Q9UBL6 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
CPNE7Q9UBL6 TSPY19P-201ENST00000418461 509 ntBASIC17.61■□□□□ 0.41
CPNE7Q9UBL6 IGHV3-47-201ENST00000425060 335 ntBASIC17.61■□□□□ 0.41
CPNE7Q9UBL6 TPM4P1-201ENST00000436100 807 ntBASIC17.61■□□□□ 0.41
CPNE7Q9UBL6 TSPY18P-201ENST00000441642 509 ntBASIC17.61■□□□□ 0.41
CPNE7Q9UBL6 AC091607.1-201ENST00000490318 1060 ntBASIC17.61■□□□□ 0.41
CPNE7Q9UBL6 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.61■□□□□ 0.41
CPNE7Q9UBL6 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPNE7Q9UBL6 AC111152.3-201ENST00000569699 673 ntBASIC17.61■□□□□ 0.41
CPNE7Q9UBL6 AP005901.3-202ENST00000581653 237 ntBASIC17.61■□□□□ 0.41
CPNE7Q9UBL6 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.61■□□□□ 0.41
CPNE7Q9UBL6 AC099336.1-202ENST00000602961 463 ntBASIC17.61■□□□□ 0.41
CPNE7Q9UBL6 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.61■□□□□ 0.41
CPNE7Q9UBL6 AL121772.3-201ENST00000610840 674 ntBASIC17.61■□□□□ 0.41
CPNE7Q9UBL6 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CPNE7Q9UBL6 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CPNE7Q9UBL6 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPNE7Q9UBL6 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CPNE7Q9UBL6 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CPNE7Q9UBL6 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CPNE7Q9UBL6 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CPNE7Q9UBL6 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPNE7Q9UBL6 AC073592.3-201ENST00000625118 1834 ntBASIC17.61■□□□□ 0.41
CPNE7Q9UBL6 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPNE7Q9UBL6 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CPNE7Q9UBL6 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPNE7Q9UBL6 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CPNE7Q9UBL6 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.6■□□□□ 0.41
CPNE7Q9UBL6 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPNE7Q9UBL6 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.6■□□□□ 0.41
CPNE7Q9UBL6 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPNE7Q9UBL6 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPNE7Q9UBL6 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms