Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
HOXC10Q9NYD6 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.8■□□□□ 0.92
HOXC10Q9NYD6 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HOXC10Q9NYD6 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.8■□□□□ 0.92
HOXC10Q9NYD6 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HOXC10Q9NYD6 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HOXC10Q9NYD6 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HOXC10Q9NYD6 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
HOXC10Q9NYD6 KRT18P58-201ENST00000527480 1120 ntBASIC20.8■□□□□ 0.92
HOXC10Q9NYD6 SLC25A1P1-201ENST00000528351 927 ntBASIC20.8■□□□□ 0.92
HOXC10Q9NYD6 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HOXC10Q9NYD6 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.8■□□□□ 0.92
HOXC10Q9NYD6 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
HOXC10Q9NYD6 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC20.8■□□□□ 0.92
HOXC10Q9NYD6 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
HOXC10Q9NYD6 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HOXC10Q9NYD6 AC243591.1-201ENST00000452967 1364 ntBASIC20.8■□□□□ 0.92
HOXC10Q9NYD6 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HOXC10Q9NYD6 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HOXC10Q9NYD6 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HOXC10Q9NYD6 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HOXC10Q9NYD6 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.8■□□□□ 0.92
HOXC10Q9NYD6 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
HOXC10Q9NYD6 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.8■□□□□ 0.92
HOXC10Q9NYD6 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
HOXC10Q9NYD6 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HOXC10Q9NYD6 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HOXC10Q9NYD6 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
HOXC10Q9NYD6 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
HOXC10Q9NYD6 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC20.79■□□□□ 0.92
HOXC10Q9NYD6 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HOXC10Q9NYD6 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.79■□□□□ 0.92
HOXC10Q9NYD6 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
HOXC10Q9NYD6 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HOXC10Q9NYD6 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HOXC10Q9NYD6 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HOXC10Q9NYD6 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HOXC10Q9NYD6 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.79■□□□□ 0.92
HOXC10Q9NYD6 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HOXC10Q9NYD6 HNRNPDP1-201ENST00000439535 754 ntBASIC20.79■□□□□ 0.92
HOXC10Q9NYD6 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.79■□□□□ 0.92
HOXC10Q9NYD6 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.79■□□□□ 0.92
HOXC10Q9NYD6 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
HOXC10Q9NYD6 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.79■□□□□ 0.92
HOXC10Q9NYD6 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
HOXC10Q9NYD6 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
HOXC10Q9NYD6 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
HOXC10Q9NYD6 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HOXC10Q9NYD6 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HOXC10Q9NYD6 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HOXC10Q9NYD6 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HOXC10Q9NYD6 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HOXC10Q9NYD6 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HOXC10Q9NYD6 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
HOXC10Q9NYD6 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HOXC10Q9NYD6 GMCL1P1-201ENST00000463439 1581 ntBASIC20.78■□□□□ 0.92
HOXC10Q9NYD6 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HOXC10Q9NYD6 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HOXC10Q9NYD6 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.78■□□□□ 0.92
HOXC10Q9NYD6 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
HOXC10Q9NYD6 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
HOXC10Q9NYD6 RPL13AP23-201ENST00000480739 586 ntBASIC20.78■□□□□ 0.92
HOXC10Q9NYD6 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC20.78■□□□□ 0.92
HOXC10Q9NYD6 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.78■□□□□ 0.92
HOXC10Q9NYD6 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HOXC10Q9NYD6 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC20.78■□□□□ 0.92
HOXC10Q9NYD6 AL049840.3-201ENST00000602669 611 ntBASIC20.78■□□□□ 0.92
HOXC10Q9NYD6 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.78■□□□□ 0.92
HOXC10Q9NYD6 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HOXC10Q9NYD6 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.78■□□□□ 0.92
HOXC10Q9NYD6 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.78■□□□□ 0.92
HOXC10Q9NYD6 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
HOXC10Q9NYD6 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HOXC10Q9NYD6 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
HOXC10Q9NYD6 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.78■□□□□ 0.92
HOXC10Q9NYD6 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HOXC10Q9NYD6 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.77■□□□□ 0.92
HOXC10Q9NYD6 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
HOXC10Q9NYD6 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
HOXC10Q9NYD6 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HOXC10Q9NYD6 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.77■□□□□ 0.92
HOXC10Q9NYD6 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
HOXC10Q9NYD6 CTNS-203ENST00000399306 803 ntTSL 3 BASIC20.77■□□□□ 0.92
HOXC10Q9NYD6 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC20.77■□□□□ 0.92
HOXC10Q9NYD6 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC20.77■□□□□ 0.92
HOXC10Q9NYD6 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
HOXC10Q9NYD6 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.77■□□□□ 0.92
HOXC10Q9NYD6 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HOXC10Q9NYD6 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.77■□□□□ 0.92
HOXC10Q9NYD6 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.77■□□□□ 0.92
HOXC10Q9NYD6 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.77■□□□□ 0.92
HOXC10Q9NYD6 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.77■□□□□ 0.92
HOXC10Q9NYD6 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
HOXC10Q9NYD6 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
HOXC10Q9NYD6 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HOXC10Q9NYD6 ANO7L1-203ENST00000602586 1720 ntBASIC20.77■□□□□ 0.92
HOXC10Q9NYD6 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.77■□□□□ 0.91
HOXC10Q9NYD6 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
HOXC10Q9NYD6 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
HOXC10Q9NYD6 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms