Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LIN7CQ9NUP9 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
LIN7CQ9NUP9 POR-209ENST00000439269 1858 ntTSL 2 BASIC15.18■□□□□ 0.02
LIN7CQ9NUP9 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LIN7CQ9NUP9 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC15.18■□□□□ 0.02
LIN7CQ9NUP9 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LIN7CQ9NUP9 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LIN7CQ9NUP9 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
LIN7CQ9NUP9 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
LIN7CQ9NUP9 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LIN7CQ9NUP9 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
LIN7CQ9NUP9 FLJ13224-201ENST00000313737 1514 ntBASIC15.17■□□□□ 0.02
LIN7CQ9NUP9 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC15.17■□□□□ 0.02
LIN7CQ9NUP9 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.17■□□□□ 0.02
LIN7CQ9NUP9 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC15.17■□□□□ 0.02
LIN7CQ9NUP9 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LIN7CQ9NUP9 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.17■□□□□ 0.02
LIN7CQ9NUP9 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LIN7CQ9NUP9 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LIN7CQ9NUP9 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
LIN7CQ9NUP9 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
LIN7CQ9NUP9 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LIN7CQ9NUP9 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LIN7CQ9NUP9 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LIN7CQ9NUP9 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.17■□□□□ 0.02
LIN7CQ9NUP9 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LIN7CQ9NUP9 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC15.17■□□□□ 0.02
LIN7CQ9NUP9 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
LIN7CQ9NUP9 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC15.17■□□□□ 0.02
LIN7CQ9NUP9 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LIN7CQ9NUP9 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LIN7CQ9NUP9 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC15.17■□□□□ 0.02
LIN7CQ9NUP9 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC15.17■□□□□ 0.02
LIN7CQ9NUP9 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LIN7CQ9NUP9 AP000593.1-201ENST00000393668 712 ntBASIC15.17■□□□□ 0.02
LIN7CQ9NUP9 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LIN7CQ9NUP9 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LIN7CQ9NUP9 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC15.17■□□□□ 0.02
LIN7CQ9NUP9 FITM1-202ENST00000559294 800 ntBASIC15.17■□□□□ 0.02
LIN7CQ9NUP9 CKBP1-201ENST00000565489 1086 ntBASIC15.17■□□□□ 0.02
LIN7CQ9NUP9 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC15.17■□□□□ 0.02
LIN7CQ9NUP9 AP000525.1-201ENST00000608286 694 ntBASIC15.17■□□□□ 0.02
LIN7CQ9NUP9 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LIN7CQ9NUP9 GLDC-219ENST00000640208 420 ntTSL 2 BASIC15.17■□□□□ 0.02
LIN7CQ9NUP9 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LIN7CQ9NUP9 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LIN7CQ9NUP9 REXO1L9P-201ENST00000604264 2108 ntBASIC15.17■□□□□ 0.02
LIN7CQ9NUP9 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
LIN7CQ9NUP9 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LIN7CQ9NUP9 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
LIN7CQ9NUP9 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LIN7CQ9NUP9 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LIN7CQ9NUP9 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LIN7CQ9NUP9 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC15.17■□□□□ 0.02
LIN7CQ9NUP9 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC15.17■□□□□ 0.02
LIN7CQ9NUP9 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LIN7CQ9NUP9 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC15.16■□□□□ 0.02
LIN7CQ9NUP9 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LIN7CQ9NUP9 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
LIN7CQ9NUP9 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LIN7CQ9NUP9 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LIN7CQ9NUP9 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC15.16■□□□□ 0.02
LIN7CQ9NUP9 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
LIN7CQ9NUP9 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LIN7CQ9NUP9 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.16■□□□□ 0.02
LIN7CQ9NUP9 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LIN7CQ9NUP9 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LIN7CQ9NUP9 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC15.16■□□□□ 0.02
LIN7CQ9NUP9 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LIN7CQ9NUP9 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC15.16■□□□□ 0.02
LIN7CQ9NUP9 CRYGFP-201ENST00000418459 633 ntBASIC15.16■□□□□ 0.02
LIN7CQ9NUP9 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC15.16■□□□□ 0.02
LIN7CQ9NUP9 MFAP1P1-201ENST00000442257 1255 ntBASIC15.16■□□□□ 0.02
LIN7CQ9NUP9 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC15.16■□□□□ 0.02
LIN7CQ9NUP9 BX088651.1-201ENST00000540551 451 ntBASIC15.16■□□□□ 0.02
LIN7CQ9NUP9 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LIN7CQ9NUP9 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LIN7CQ9NUP9 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC15.16■□□□□ 0.02
LIN7CQ9NUP9 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LIN7CQ9NUP9 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LIN7CQ9NUP9 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LIN7CQ9NUP9 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LIN7CQ9NUP9 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LIN7CQ9NUP9 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LIN7CQ9NUP9 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
LIN7CQ9NUP9 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LIN7CQ9NUP9 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LIN7CQ9NUP9 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
LIN7CQ9NUP9 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LIN7CQ9NUP9 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC15.15■□□□□ 0.02
LIN7CQ9NUP9 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LIN7CQ9NUP9 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LIN7CQ9NUP9 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
LIN7CQ9NUP9 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC15.15■□□□□ 0.02
LIN7CQ9NUP9 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.15■□□□□ 0.02
LIN7CQ9NUP9 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
LIN7CQ9NUP9 MMP23A-201ENST00000234610 1017 ntBASIC15.15■□□□□ 0.02
LIN7CQ9NUP9 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
LIN7CQ9NUP9 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LIN7CQ9NUP9 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms