Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCM2LQ9NUG4 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCM2LQ9NUG4 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.36■□□□□ 0.37
CCM2LQ9NUG4 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CCM2LQ9NUG4 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
CCM2LQ9NUG4 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CCM2LQ9NUG4 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CCM2LQ9NUG4 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCM2LQ9NUG4 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.36■□□□□ 0.37
CCM2LQ9NUG4 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.36■□□□□ 0.37
CCM2LQ9NUG4 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCM2LQ9NUG4 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCM2LQ9NUG4 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.35■□□□□ 0.37
CCM2LQ9NUG4 TNRC18P3-201ENST00000441896 2691 ntBASIC17.35■□□□□ 0.37
CCM2LQ9NUG4 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCM2LQ9NUG4 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CCM2LQ9NUG4 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.35■□□□□ 0.37
CCM2LQ9NUG4 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CCM2LQ9NUG4 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCM2LQ9NUG4 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCM2LQ9NUG4 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCM2LQ9NUG4 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCM2LQ9NUG4 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.35■□□□□ 0.37
CCM2LQ9NUG4 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCM2LQ9NUG4 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CCM2LQ9NUG4 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CCM2LQ9NUG4 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCM2LQ9NUG4 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCM2LQ9NUG4 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.35■□□□□ 0.37
CCM2LQ9NUG4 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.35■□□□□ 0.37
CCM2LQ9NUG4 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.35■□□□□ 0.37
CCM2LQ9NUG4 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.35■□□□□ 0.37
CCM2LQ9NUG4 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.35■□□□□ 0.37
CCM2LQ9NUG4 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCM2LQ9NUG4 AC005363.2-201ENST00000618631 242 ntBASIC17.35■□□□□ 0.37
CCM2LQ9NUG4 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCM2LQ9NUG4 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CCM2LQ9NUG4 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CCM2LQ9NUG4 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CCM2LQ9NUG4 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.35■□□□□ 0.37
CCM2LQ9NUG4 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCM2LQ9NUG4 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CCM2LQ9NUG4 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCM2LQ9NUG4 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.35■□□□□ 0.37
CCM2LQ9NUG4 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.35■□□□□ 0.37
CCM2LQ9NUG4 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCM2LQ9NUG4 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCM2LQ9NUG4 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.35■□□□□ 0.37
CCM2LQ9NUG4 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CCM2LQ9NUG4 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCM2LQ9NUG4 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCM2LQ9NUG4 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCM2LQ9NUG4 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CCM2LQ9NUG4 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CCM2LQ9NUG4 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CCM2LQ9NUG4 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.34■□□□□ 0.37
CCM2LQ9NUG4 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.34■□□□□ 0.37
CCM2LQ9NUG4 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CCM2LQ9NUG4 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CCM2LQ9NUG4 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCM2LQ9NUG4 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CCM2LQ9NUG4 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.34■□□□□ 0.37
CCM2LQ9NUG4 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CCM2LQ9NUG4 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CCM2LQ9NUG4 MIR6786-201ENST00000616843 113 ntBASIC17.34■□□□□ 0.37
CCM2LQ9NUG4 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.34■□□□□ 0.37
CCM2LQ9NUG4 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.34■□□□□ 0.37
CCM2LQ9NUG4 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCM2LQ9NUG4 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCM2LQ9NUG4 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.34■□□□□ 0.37
CCM2LQ9NUG4 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.33■□□□□ 0.37
CCM2LQ9NUG4 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CCM2LQ9NUG4 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCM2LQ9NUG4 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.33■□□□□ 0.37
CCM2LQ9NUG4 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCM2LQ9NUG4 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CCM2LQ9NUG4 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
CCM2LQ9NUG4 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.33■□□□□ 0.37
CCM2LQ9NUG4 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CCM2LQ9NUG4 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCM2LQ9NUG4 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCM2LQ9NUG4 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCM2LQ9NUG4 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCM2LQ9NUG4 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.33■□□□□ 0.36
CCM2LQ9NUG4 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.33■□□□□ 0.36
CCM2LQ9NUG4 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCM2LQ9NUG4 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.33■□□□□ 0.36
CCM2LQ9NUG4 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.33■□□□□ 0.36
CCM2LQ9NUG4 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.33■□□□□ 0.36
CCM2LQ9NUG4 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.33■□□□□ 0.36
CCM2LQ9NUG4 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.33■□□□□ 0.36
CCM2LQ9NUG4 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCM2LQ9NUG4 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCM2LQ9NUG4 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCM2LQ9NUG4 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCM2LQ9NUG4 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCM2LQ9NUG4 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCM2LQ9NUG4 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCM2LQ9NUG4 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCM2LQ9NUG4 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms