Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDLIM7Q9NR12 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.32■□□□□ 0.84
PDLIM7Q9NR12 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.32■□□□□ 0.84
PDLIM7Q9NR12 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PDLIM7Q9NR12 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20.32■□□□□ 0.84
PDLIM7Q9NR12 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
PDLIM7Q9NR12 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.32■□□□□ 0.84
PDLIM7Q9NR12 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.32■□□□□ 0.84
PDLIM7Q9NR12 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.32■□□□□ 0.84
PDLIM7Q9NR12 LINC02084-201ENST00000606069 1096 ntBASIC20.32■□□□□ 0.84
PDLIM7Q9NR12 AC099343.3-201ENST00000605834 2503 ntBASIC20.32■□□□□ 0.84
PDLIM7Q9NR12 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PDLIM7Q9NR12 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PDLIM7Q9NR12 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
PDLIM7Q9NR12 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
PDLIM7Q9NR12 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDLIM7Q9NR12 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDLIM7Q9NR12 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDLIM7Q9NR12 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDLIM7Q9NR12 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
PDLIM7Q9NR12 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDLIM7Q9NR12 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PDLIM7Q9NR12 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDLIM7Q9NR12 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
PDLIM7Q9NR12 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.31■□□□□ 0.84
PDLIM7Q9NR12 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PDLIM7Q9NR12 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PDLIM7Q9NR12 AL024508.2-201ENST00000607749 1894 ntBASIC20.31■□□□□ 0.84
PDLIM7Q9NR12 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
PDLIM7Q9NR12 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
PDLIM7Q9NR12 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDLIM7Q9NR12 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
PDLIM7Q9NR12 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC20.31■□□□□ 0.84
PDLIM7Q9NR12 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.31■□□□□ 0.84
PDLIM7Q9NR12 FGFR3P6-201ENST00000457012 610 ntBASIC20.31■□□□□ 0.84
PDLIM7Q9NR12 SCARNA2-201ENST00000458748 420 ntBASIC20.31■□□□□ 0.84
PDLIM7Q9NR12 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC20.31■□□□□ 0.84
PDLIM7Q9NR12 AC126763.1-201ENST00000552015 2118 ntBASIC20.31■□□□□ 0.84
PDLIM7Q9NR12 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PDLIM7Q9NR12 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDLIM7Q9NR12 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PDLIM7Q9NR12 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDLIM7Q9NR12 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.31■□□□□ 0.84
PDLIM7Q9NR12 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PDLIM7Q9NR12 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDLIM7Q9NR12 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.31■□□□□ 0.84
PDLIM7Q9NR12 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PDLIM7Q9NR12 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDLIM7Q9NR12 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.3■□□□□ 0.84
PDLIM7Q9NR12 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PDLIM7Q9NR12 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDLIM7Q9NR12 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDLIM7Q9NR12 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDLIM7Q9NR12 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDLIM7Q9NR12 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDLIM7Q9NR12 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDLIM7Q9NR12 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDLIM7Q9NR12 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDLIM7Q9NR12 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.3■□□□□ 0.84
PDLIM7Q9NR12 PMS2P2-201ENST00000425039 1128 ntBASIC20.3■□□□□ 0.84
PDLIM7Q9NR12 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC20.3■□□□□ 0.84
PDLIM7Q9NR12 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC20.3■□□□□ 0.84
PDLIM7Q9NR12 CAND2-206ENST00000626378 333 ntTSL 5 BASIC20.3■□□□□ 0.84
PDLIM7Q9NR12 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDLIM7Q9NR12 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.3■□□□□ 0.84
PDLIM7Q9NR12 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PDLIM7Q9NR12 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.3■□□□□ 0.84
PDLIM7Q9NR12 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDLIM7Q9NR12 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDLIM7Q9NR12 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.3■□□□□ 0.84
PDLIM7Q9NR12 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PDLIM7Q9NR12 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDLIM7Q9NR12 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PDLIM7Q9NR12 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PDLIM7Q9NR12 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDLIM7Q9NR12 AL138781.2-201ENST00000617896 1843 ntBASIC20.3■□□□□ 0.84
PDLIM7Q9NR12 AC073592.3-201ENST00000625118 1834 ntBASIC20.3■□□□□ 0.84
PDLIM7Q9NR12 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
PDLIM7Q9NR12 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.29■□□□□ 0.84
PDLIM7Q9NR12 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PDLIM7Q9NR12 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDLIM7Q9NR12 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.29■□□□□ 0.84
PDLIM7Q9NR12 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
PDLIM7Q9NR12 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.29■□□□□ 0.84
PDLIM7Q9NR12 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDLIM7Q9NR12 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PDLIM7Q9NR12 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
PDLIM7Q9NR12 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDLIM7Q9NR12 HES2-202ENST00000377836 507 ntTSL 2 BASIC20.29■□□□□ 0.84
PDLIM7Q9NR12 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
PDLIM7Q9NR12 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
PDLIM7Q9NR12 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDLIM7Q9NR12 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.29■□□□□ 0.84
PDLIM7Q9NR12 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC20.29■□□□□ 0.84
PDLIM7Q9NR12 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PDLIM7Q9NR12 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.29■□□□□ 0.84
PDLIM7Q9NR12 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDLIM7Q9NR12 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDLIM7Q9NR12 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDLIM7Q9NR12 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms