Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
NECTIN3Q9NQS3 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.48■□□□□ 0.39
NECTIN3Q9NQS3 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NECTIN3Q9NQS3 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
NECTIN3Q9NQS3 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NECTIN3Q9NQS3 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NECTIN3Q9NQS3 RNF152P1-201ENST00000397754 604 ntBASIC17.48■□□□□ 0.39
NECTIN3Q9NQS3 AP000523.1-201ENST00000398242 1049 ntBASIC17.48■□□□□ 0.39
NECTIN3Q9NQS3 MIR1224-201ENST00000408193 85 ntBASIC17.48■□□□□ 0.39
NECTIN3Q9NQS3 TSPY5P-201ENST00000426936 936 ntBASIC17.48■□□□□ 0.39
NECTIN3Q9NQS3 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.48■□□□□ 0.39
NECTIN3Q9NQS3 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.48■□□□□ 0.39
NECTIN3Q9NQS3 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.48■□□□□ 0.39
NECTIN3Q9NQS3 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.48■□□□□ 0.39
NECTIN3Q9NQS3 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NECTIN3Q9NQS3 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.48■□□□□ 0.39
NECTIN3Q9NQS3 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NECTIN3Q9NQS3 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.48■□□□□ 0.39
NECTIN3Q9NQS3 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.48■□□□□ 0.39
NECTIN3Q9NQS3 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.48■□□□□ 0.39
NECTIN3Q9NQS3 AC024243.1-201ENST00000609234 778 ntBASIC17.48■□□□□ 0.39
NECTIN3Q9NQS3 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NECTIN3Q9NQS3 AL031432.5-201ENST00000641059 760 ntBASIC17.48■□□□□ 0.39
NECTIN3Q9NQS3 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NECTIN3Q9NQS3 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.48■□□□□ 0.39
NECTIN3Q9NQS3 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.48■□□□□ 0.39
NECTIN3Q9NQS3 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
NECTIN3Q9NQS3 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.48■□□□□ 0.39
NECTIN3Q9NQS3 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NECTIN3Q9NQS3 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NECTIN3Q9NQS3 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NECTIN3Q9NQS3 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
NECTIN3Q9NQS3 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
NECTIN3Q9NQS3 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.47■□□□□ 0.39
NECTIN3Q9NQS3 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NECTIN3Q9NQS3 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.47■□□□□ 0.39
NECTIN3Q9NQS3 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
NECTIN3Q9NQS3 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
NECTIN3Q9NQS3 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NECTIN3Q9NQS3 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NECTIN3Q9NQS3 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.47■□□□□ 0.39
NECTIN3Q9NQS3 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
NECTIN3Q9NQS3 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.47■□□□□ 0.39
NECTIN3Q9NQS3 KRT18P23-201ENST00000435622 1283 ntBASIC17.47■□□□□ 0.39
NECTIN3Q9NQS3 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.47■□□□□ 0.39
NECTIN3Q9NQS3 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.47■□□□□ 0.39
NECTIN3Q9NQS3 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
NECTIN3Q9NQS3 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NECTIN3Q9NQS3 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NECTIN3Q9NQS3 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NECTIN3Q9NQS3 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.47■□□□□ 0.39
NECTIN3Q9NQS3 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NECTIN3Q9NQS3 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NECTIN3Q9NQS3 AC034236.2-201ENST00000606662 1610 ntBASIC17.47■□□□□ 0.39
NECTIN3Q9NQS3 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NECTIN3Q9NQS3 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NECTIN3Q9NQS3 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NECTIN3Q9NQS3 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.46■□□□□ 0.39
NECTIN3Q9NQS3 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NECTIN3Q9NQS3 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
NECTIN3Q9NQS3 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
NECTIN3Q9NQS3 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NECTIN3Q9NQS3 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
NECTIN3Q9NQS3 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NECTIN3Q9NQS3 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NECTIN3Q9NQS3 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.46■□□□□ 0.39
NECTIN3Q9NQS3 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NECTIN3Q9NQS3 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
NECTIN3Q9NQS3 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NECTIN3Q9NQS3 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NECTIN3Q9NQS3 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
NECTIN3Q9NQS3 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NECTIN3Q9NQS3 AC063952.2-201ENST00000498792 1227 ntBASIC17.46■□□□□ 0.39
NECTIN3Q9NQS3 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.46■□□□□ 0.39
NECTIN3Q9NQS3 AC010331.1-201ENST00000611423 582 ntBASIC17.46■□□□□ 0.39
NECTIN3Q9NQS3 AC112497.1-201ENST00000624824 639 ntBASIC17.46■□□□□ 0.39
NECTIN3Q9NQS3 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
NECTIN3Q9NQS3 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
NECTIN3Q9NQS3 ABALON-201ENST00000629058 1903 ntBASIC17.46■□□□□ 0.39
NECTIN3Q9NQS3 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
NECTIN3Q9NQS3 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
NECTIN3Q9NQS3 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NECTIN3Q9NQS3 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.46■□□□□ 0.39
NECTIN3Q9NQS3 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NECTIN3Q9NQS3 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.46■□□□□ 0.39
NECTIN3Q9NQS3 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NECTIN3Q9NQS3 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NECTIN3Q9NQS3 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
NECTIN3Q9NQS3 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NECTIN3Q9NQS3 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NECTIN3Q9NQS3 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NECTIN3Q9NQS3 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.45■□□□□ 0.38
NECTIN3Q9NQS3 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.45■□□□□ 0.38
NECTIN3Q9NQS3 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NECTIN3Q9NQS3 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NECTIN3Q9NQS3 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NECTIN3Q9NQS3 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NECTIN3Q9NQS3 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NECTIN3Q9NQS3 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
NECTIN3Q9NQS3 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms