Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC21.51■■□□□ 1.03
RTN4Q9NQC3 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
RTN4Q9NQC3 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RTN4Q9NQC3 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RTN4Q9NQC3 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RTN4Q9NQC3 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RTN4Q9NQC3 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RTN4Q9NQC3 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RTN4Q9NQC3 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.51■■□□□ 1.03
RTN4Q9NQC3 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
RTN4Q9NQC3 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.51■■□□□ 1.03
RTN4Q9NQC3 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.51■■□□□ 1.03
RTN4Q9NQC3 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC21.51■■□□□ 1.03
RTN4Q9NQC3 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.51■■□□□ 1.03
RTN4Q9NQC3 AL589743.5-201ENST00000616611 1050 ntBASIC21.51■■□□□ 1.03
RTN4Q9NQC3 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RTN4Q9NQC3 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC21.51■■□□□ 1.03
RTN4Q9NQC3 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RTN4Q9NQC3 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.51■■□□□ 1.03
RTN4Q9NQC3 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC21.51■■□□□ 1.03
RTN4Q9NQC3 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC21.51■■□□□ 1.03
RTN4Q9NQC3 OR6D1P-203ENST00000641209 4860 ntBASIC21.51■■□□□ 1.03
RTN4Q9NQC3 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RTN4Q9NQC3 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RTN4Q9NQC3 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RTN4Q9NQC3 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RTN4Q9NQC3 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
RTN4Q9NQC3 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RTN4Q9NQC3 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC21.51■■□□□ 1.03
RTN4Q9NQC3 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC21.51■■□□□ 1.03
RTN4Q9NQC3 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
RTN4Q9NQC3 KRT17P1-201ENST00000399211 1546 ntBASIC21.5■■□□□ 1.03
RTN4Q9NQC3 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RTN4Q9NQC3 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RTN4Q9NQC3 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RTN4Q9NQC3 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.5■■□□□ 1.03
RTN4Q9NQC3 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
RTN4Q9NQC3 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.5■■□□□ 1.03
RTN4Q9NQC3 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.5■■□□□ 1.03
RTN4Q9NQC3 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.5■■□□□ 1.03
RTN4Q9NQC3 AC008694.1-202ENST00000636953 945 ntBASIC21.5■■□□□ 1.03
RTN4Q9NQC3 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
RTN4Q9NQC3 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC21.5■■□□□ 1.03
RTN4Q9NQC3 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC21.5■■□□□ 1.03
RTN4Q9NQC3 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RTN4Q9NQC3 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.5■■□□□ 1.03
RTN4Q9NQC3 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RTN4Q9NQC3 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
RTN4Q9NQC3 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RTN4Q9NQC3 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RTN4Q9NQC3 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RTN4Q9NQC3 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC21.5■■□□□ 1.03
RTN4Q9NQC3 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RTN4Q9NQC3 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.5■■□□□ 1.03
RTN4Q9NQC3 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RTN4Q9NQC3 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RTN4Q9NQC3 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
RTN4Q9NQC3 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
RTN4Q9NQC3 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RTN4Q9NQC3 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
RTN4Q9NQC3 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC21.49■■□□□ 1.03
RTN4Q9NQC3 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
RTN4Q9NQC3 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RTN4Q9NQC3 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RTN4Q9NQC3 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RTN4Q9NQC3 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RTN4Q9NQC3 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
RTN4Q9NQC3 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RTN4Q9NQC3 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
RTN4Q9NQC3 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.49■■□□□ 1.03
RTN4Q9NQC3 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.49■■□□□ 1.03
RTN4Q9NQC3 HNRNPA1P23-201ENST00000491091 1133 ntBASIC21.49■■□□□ 1.03
RTN4Q9NQC3 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RTN4Q9NQC3 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.49■■□□□ 1.03
RTN4Q9NQC3 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.49■■□□□ 1.03
RTN4Q9NQC3 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
RTN4Q9NQC3 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RTN4Q9NQC3 OR10C1-204ENST00000622521 1039 ntBASIC21.49■■□□□ 1.03
RTN4Q9NQC3 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.49■■□□□ 1.03
RTN4Q9NQC3 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.49■■□□□ 1.03
RTN4Q9NQC3 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RTN4Q9NQC3 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RTN4Q9NQC3 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
RTN4Q9NQC3 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RTN4Q9NQC3 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
RTN4Q9NQC3 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RTN4Q9NQC3 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.49■■□□□ 1.03
RTN4Q9NQC3 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RTN4Q9NQC3 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RTN4Q9NQC3 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
RTN4Q9NQC3 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
RTN4Q9NQC3 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC21.48■■□□□ 1.03
RTN4Q9NQC3 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.48■■□□□ 1.03
RTN4Q9NQC3 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC21.48■■□□□ 1.03
RTN4Q9NQC3 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RTN4Q9NQC3 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RTN4Q9NQC3 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC21.48■■□□□ 1.03
RTN4Q9NQC3 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RTN4Q9NQC3 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RTN4Q9NQC3 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms