Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
VTA1Q9NP79 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
VTA1Q9NP79 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VTA1Q9NP79 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
VTA1Q9NP79 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.32■□□□□ 0.84
VTA1Q9NP79 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.32■□□□□ 0.84
VTA1Q9NP79 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.32■□□□□ 0.84
VTA1Q9NP79 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VTA1Q9NP79 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
VTA1Q9NP79 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
VTA1Q9NP79 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VTA1Q9NP79 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
VTA1Q9NP79 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC20.32■□□□□ 0.84
VTA1Q9NP79 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC20.32■□□□□ 0.84
VTA1Q9NP79 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.32■□□□□ 0.84
VTA1Q9NP79 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.32■□□□□ 0.84
VTA1Q9NP79 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.32■□□□□ 0.84
VTA1Q9NP79 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
VTA1Q9NP79 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC20.32■□□□□ 0.84
VTA1Q9NP79 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC20.32■□□□□ 0.84
VTA1Q9NP79 AL049840.3-201ENST00000602669 611 ntBASIC20.32■□□□□ 0.84
VTA1Q9NP79 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
VTA1Q9NP79 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
VTA1Q9NP79 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
VTA1Q9NP79 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.32■□□□□ 0.84
VTA1Q9NP79 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.32■□□□□ 0.84
VTA1Q9NP79 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
VTA1Q9NP79 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VTA1Q9NP79 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VTA1Q9NP79 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VTA1Q9NP79 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.32■□□□□ 0.84
VTA1Q9NP79 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
VTA1Q9NP79 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VTA1Q9NP79 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VTA1Q9NP79 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VTA1Q9NP79 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
VTA1Q9NP79 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
VTA1Q9NP79 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.31■□□□□ 0.84
VTA1Q9NP79 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
VTA1Q9NP79 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
VTA1Q9NP79 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.31■□□□□ 0.84
VTA1Q9NP79 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.31■□□□□ 0.84
VTA1Q9NP79 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
VTA1Q9NP79 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
VTA1Q9NP79 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
VTA1Q9NP79 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VTA1Q9NP79 RPS2P28-201ENST00000314255 741 ntBASIC20.31■□□□□ 0.84
VTA1Q9NP79 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
VTA1Q9NP79 CTNS-203ENST00000399306 803 ntTSL 3 BASIC20.31■□□□□ 0.84
VTA1Q9NP79 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
VTA1Q9NP79 HNRNPDP1-201ENST00000439535 754 ntBASIC20.31■□□□□ 0.84
VTA1Q9NP79 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.31■□□□□ 0.84
VTA1Q9NP79 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.31■□□□□ 0.84
VTA1Q9NP79 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VTA1Q9NP79 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC20.31■□□□□ 0.84
VTA1Q9NP79 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.31■□□□□ 0.84
VTA1Q9NP79 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
VTA1Q9NP79 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VTA1Q9NP79 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VTA1Q9NP79 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VTA1Q9NP79 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VTA1Q9NP79 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VTA1Q9NP79 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
VTA1Q9NP79 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
VTA1Q9NP79 GMCL1P1-201ENST00000463439 1581 ntBASIC20.3■□□□□ 0.84
VTA1Q9NP79 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.3■□□□□ 0.84
VTA1Q9NP79 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VTA1Q9NP79 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
VTA1Q9NP79 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VTA1Q9NP79 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.3■□□□□ 0.84
VTA1Q9NP79 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
VTA1Q9NP79 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VTA1Q9NP79 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
VTA1Q9NP79 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20.3■□□□□ 0.84
VTA1Q9NP79 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.3■□□□□ 0.84
VTA1Q9NP79 KRT18P58-201ENST00000527480 1120 ntBASIC20.3■□□□□ 0.84
VTA1Q9NP79 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
VTA1Q9NP79 AC106730.1-201ENST00000566722 1090 ntBASIC20.3■□□□□ 0.84
VTA1Q9NP79 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.3■□□□□ 0.84
VTA1Q9NP79 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC20.3■□□□□ 0.84
VTA1Q9NP79 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.3■□□□□ 0.84
VTA1Q9NP79 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
VTA1Q9NP79 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.3■□□□□ 0.84
VTA1Q9NP79 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VTA1Q9NP79 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.3■□□□□ 0.84
VTA1Q9NP79 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
VTA1Q9NP79 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.3■□□□□ 0.84
VTA1Q9NP79 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VTA1Q9NP79 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
VTA1Q9NP79 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
VTA1Q9NP79 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
VTA1Q9NP79 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
VTA1Q9NP79 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
VTA1Q9NP79 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
VTA1Q9NP79 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
VTA1Q9NP79 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC20.29■□□□□ 0.84
VTA1Q9NP79 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
VTA1Q9NP79 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
VTA1Q9NP79 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC20.29■□□□□ 0.84
VTA1Q9NP79 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms