Protein–RNA interactions for Protein: Q9HCF6

TRPM3, Transient receptor potential cation channel subfamily M member 3, humanhuman

Predicted RBP Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM3Q9HCF6 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
TRPM3Q9HCF6 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC24.37■■□□□ 1.49
TRPM3Q9HCF6 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
TRPM3Q9HCF6 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC24.37■■□□□ 1.49
TRPM3Q9HCF6 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
TRPM3Q9HCF6 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TRPM3Q9HCF6 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
TRPM3Q9HCF6 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC24.37■■□□□ 1.49
TRPM3Q9HCF6 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC24.37■■□□□ 1.49
TRPM3Q9HCF6 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TRPM3Q9HCF6 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC24.37■■□□□ 1.49
TRPM3Q9HCF6 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
TRPM3Q9HCF6 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TRPM3Q9HCF6 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC24.36■■□□□ 1.49
TRPM3Q9HCF6 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TRPM3Q9HCF6 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
TRPM3Q9HCF6 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
TRPM3Q9HCF6 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC24.36■■□□□ 1.49
TRPM3Q9HCF6 HTR5BP-201ENST00000430851 1154 ntBASIC24.36■■□□□ 1.49
TRPM3Q9HCF6 AC122714.2-201ENST00000502787 707 ntBASIC24.36■■□□□ 1.49
TRPM3Q9HCF6 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC24.36■■□□□ 1.49
TRPM3Q9HCF6 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC24.36■■□□□ 1.49
TRPM3Q9HCF6 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TRPM3Q9HCF6 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC24.36■■□□□ 1.49
TRPM3Q9HCF6 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
TRPM3Q9HCF6 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TRPM3Q9HCF6 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TRPM3Q9HCF6 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TRPM3Q9HCF6 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TRPM3Q9HCF6 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
TRPM3Q9HCF6 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC24.35■■□□□ 1.49
TRPM3Q9HCF6 SPDYE21P-201ENST00000413323 827 ntBASIC24.35■■□□□ 1.49
TRPM3Q9HCF6 AC254562.1-201ENST00000417586 456 ntBASIC24.35■■□□□ 1.49
TRPM3Q9HCF6 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
TRPM3Q9HCF6 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC24.35■■□□□ 1.49
TRPM3Q9HCF6 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC24.35■■□□□ 1.49
TRPM3Q9HCF6 PGM5P2-202ENST00000637225 1043 ntBASIC24.35■■□□□ 1.49
TRPM3Q9HCF6 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC24.35■■□□□ 1.49
TRPM3Q9HCF6 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TRPM3Q9HCF6 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC24.35■■□□□ 1.49
TRPM3Q9HCF6 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC24.35■■□□□ 1.49
TRPM3Q9HCF6 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
TRPM3Q9HCF6 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC24.35■■□□□ 1.49
TRPM3Q9HCF6 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
TRPM3Q9HCF6 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC24.35■■□□□ 1.49
TRPM3Q9HCF6 CFL1-202ENST00000524553 860 ntTSL 2 BASIC24.35■■□□□ 1.49
TRPM3Q9HCF6 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC24.35■■□□□ 1.49
TRPM3Q9HCF6 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TRPM3Q9HCF6 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC24.35■■□□□ 1.49
TRPM3Q9HCF6 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
TRPM3Q9HCF6 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TRPM3Q9HCF6 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
TRPM3Q9HCF6 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TRPM3Q9HCF6 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TRPM3Q9HCF6 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC24.34■■□□□ 1.49
TRPM3Q9HCF6 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
TRPM3Q9HCF6 COBL-210ENST00000632460 1941 ntTSL 5 BASIC24.34■■□□□ 1.49
TRPM3Q9HCF6 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TRPM3Q9HCF6 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
TRPM3Q9HCF6 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC24.34■■□□□ 1.49
TRPM3Q9HCF6 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC24.34■■□□□ 1.49
TRPM3Q9HCF6 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
TRPM3Q9HCF6 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC24.34■■□□□ 1.49
TRPM3Q9HCF6 RPS15-207ENST00000591032 550 ntTSL 3 BASIC24.34■■□□□ 1.49
TRPM3Q9HCF6 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC24.34■■□□□ 1.49
TRPM3Q9HCF6 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
TRPM3Q9HCF6 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC24.34■■□□□ 1.49
TRPM3Q9HCF6 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
TRPM3Q9HCF6 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TRPM3Q9HCF6 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC24.34■■□□□ 1.49
TRPM3Q9HCF6 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
TRPM3Q9HCF6 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TRPM3Q9HCF6 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
TRPM3Q9HCF6 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
TRPM3Q9HCF6 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
TRPM3Q9HCF6 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
TRPM3Q9HCF6 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC24.33■■□□□ 1.49
TRPM3Q9HCF6 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC24.33■■□□□ 1.49
TRPM3Q9HCF6 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC24.33■■□□□ 1.49
TRPM3Q9HCF6 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC24.33■■□□□ 1.49
TRPM3Q9HCF6 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC24.33■■□□□ 1.49
TRPM3Q9HCF6 AC018845.2-201ENST00000568326 409 ntBASIC24.33■■□□□ 1.49
TRPM3Q9HCF6 TCAP-202ENST00000578283 583 ntTSL 5 BASIC24.33■■□□□ 1.49
TRPM3Q9HCF6 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
TRPM3Q9HCF6 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
TRPM3Q9HCF6 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC24.33■■□□□ 1.49
TRPM3Q9HCF6 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
TRPM3Q9HCF6 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
TRPM3Q9HCF6 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
TRPM3Q9HCF6 ADM-208ENST00000534464 1640 ntTSL 2 BASIC24.33■■□□□ 1.49
TRPM3Q9HCF6 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.48
TRPM3Q9HCF6 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
TRPM3Q9HCF6 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
TRPM3Q9HCF6 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
TRPM3Q9HCF6 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
TRPM3Q9HCF6 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
TRPM3Q9HCF6 AC092865.6-201ENST00000642101 219 ntBASIC24.32■■□□□ 1.48
TRPM3Q9HCF6 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC24.32■■□□□ 1.48
TRPM3Q9HCF6 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC24.32■■□□□ 1.48
TRPM3Q9HCF6 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms