Protein–RNA interactions for Protein: Q9HBW1

LRRC4, Leucine-rich repeat-containing protein 4, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC4Q9HBW1 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRRC4Q9HBW1 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRRC4Q9HBW1 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRRC4Q9HBW1 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRRC4Q9HBW1 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
LRRC4Q9HBW1 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRRC4Q9HBW1 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LRRC4Q9HBW1 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LRRC4Q9HBW1 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LRRC4Q9HBW1 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRRC4Q9HBW1 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.2■□□□□ 0.66
LRRC4Q9HBW1 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRRC4Q9HBW1 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LRRC4Q9HBW1 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRRC4Q9HBW1 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRRC4Q9HBW1 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.2■□□□□ 0.66
LRRC4Q9HBW1 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.2■□□□□ 0.66
LRRC4Q9HBW1 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
LRRC4Q9HBW1 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.2■□□□□ 0.66
LRRC4Q9HBW1 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.2■□□□□ 0.66
LRRC4Q9HBW1 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRRC4Q9HBW1 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRRC4Q9HBW1 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRRC4Q9HBW1 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRRC4Q9HBW1 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.2■□□□□ 0.66
LRRC4Q9HBW1 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LRRC4Q9HBW1 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRRC4Q9HBW1 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.2■□□□□ 0.66
LRRC4Q9HBW1 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRRC4Q9HBW1 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LRRC4Q9HBW1 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.19■□□□□ 0.66
LRRC4Q9HBW1 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRRC4Q9HBW1 AC009113.1-201ENST00000570267 2443 ntBASIC19.19■□□□□ 0.66
LRRC4Q9HBW1 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRRC4Q9HBW1 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRRC4Q9HBW1 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.19■□□□□ 0.66
LRRC4Q9HBW1 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRRC4Q9HBW1 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.19■□□□□ 0.66
LRRC4Q9HBW1 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.19■□□□□ 0.66
LRRC4Q9HBW1 AC091076.1-201ENST00000610741 619 ntBASIC19.19■□□□□ 0.66
LRRC4Q9HBW1 AC116407.4-201ENST00000623319 1061 ntBASIC19.19■□□□□ 0.66
LRRC4Q9HBW1 AP000550.4-202ENST00000639755 178 ntBASIC19.19■□□□□ 0.66
LRRC4Q9HBW1 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRRC4Q9HBW1 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LRRC4Q9HBW1 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRRC4Q9HBW1 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRRC4Q9HBW1 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRRC4Q9HBW1 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRRC4Q9HBW1 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRRC4Q9HBW1 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.19■□□□□ 0.66
LRRC4Q9HBW1 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
LRRC4Q9HBW1 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRRC4Q9HBW1 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
LRRC4Q9HBW1 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRRC4Q9HBW1 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRRC4Q9HBW1 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
LRRC4Q9HBW1 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC4Q9HBW1 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC4Q9HBW1 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC4Q9HBW1 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC4Q9HBW1 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.18■□□□□ 0.66
LRRC4Q9HBW1 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC4Q9HBW1 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC4Q9HBW1 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
LRRC4Q9HBW1 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC4Q9HBW1 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.18■□□□□ 0.66
LRRC4Q9HBW1 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC4Q9HBW1 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC4Q9HBW1 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC4Q9HBW1 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC4Q9HBW1 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC4Q9HBW1 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC4Q9HBW1 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
LRRC4Q9HBW1 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.18■□□□□ 0.66
LRRC4Q9HBW1 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.18■□□□□ 0.66
LRRC4Q9HBW1 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC4Q9HBW1 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC4Q9HBW1 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.18■□□□□ 0.66
LRRC4Q9HBW1 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.18■□□□□ 0.66
LRRC4Q9HBW1 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.18■□□□□ 0.66
LRRC4Q9HBW1 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.18■□□□□ 0.66
LRRC4Q9HBW1 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.18■□□□□ 0.66
LRRC4Q9HBW1 AC011498.5-201ENST00000592027 486 ntBASIC19.18■□□□□ 0.66
LRRC4Q9HBW1 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.18■□□□□ 0.66
LRRC4Q9HBW1 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC4Q9HBW1 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
LRRC4Q9HBW1 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC4Q9HBW1 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.18■□□□□ 0.66
LRRC4Q9HBW1 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
LRRC4Q9HBW1 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
LRRC4Q9HBW1 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
LRRC4Q9HBW1 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC4Q9HBW1 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC4Q9HBW1 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC4Q9HBW1 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
LRRC4Q9HBW1 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC4Q9HBW1 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC4Q9HBW1 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.17■□□□□ 0.66
LRRC4Q9HBW1 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC4Q9HBW1 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms