Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
POLR1BQ9H9Y6 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
POLR1BQ9H9Y6 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
POLR1BQ9H9Y6 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
POLR1BQ9H9Y6 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
POLR1BQ9H9Y6 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
POLR1BQ9H9Y6 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.03■□□□□ 0.48
POLR1BQ9H9Y6 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.03■□□□□ 0.48
POLR1BQ9H9Y6 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
POLR1BQ9H9Y6 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.03■□□□□ 0.48
POLR1BQ9H9Y6 AC068880.1-201ENST00000507289 2297 ntBASIC18.03■□□□□ 0.48
POLR1BQ9H9Y6 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
POLR1BQ9H9Y6 KRT8P10-201ENST00000450021 1447 ntBASIC18.03■□□□□ 0.48
POLR1BQ9H9Y6 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
POLR1BQ9H9Y6 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
POLR1BQ9H9Y6 NOC2LP1-202ENST00000452600 2235 ntBASIC18.03■□□□□ 0.48
POLR1BQ9H9Y6 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
POLR1BQ9H9Y6 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
POLR1BQ9H9Y6 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
POLR1BQ9H9Y6 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.03■□□□□ 0.48
POLR1BQ9H9Y6 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
POLR1BQ9H9Y6 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
POLR1BQ9H9Y6 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
POLR1BQ9H9Y6 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
POLR1BQ9H9Y6 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.02■□□□□ 0.48
POLR1BQ9H9Y6 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
POLR1BQ9H9Y6 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
POLR1BQ9H9Y6 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.02■□□□□ 0.48
POLR1BQ9H9Y6 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.02■□□□□ 0.48
POLR1BQ9H9Y6 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
POLR1BQ9H9Y6 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
POLR1BQ9H9Y6 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
POLR1BQ9H9Y6 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
POLR1BQ9H9Y6 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
POLR1BQ9H9Y6 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
POLR1BQ9H9Y6 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.02■□□□□ 0.48
POLR1BQ9H9Y6 NUS1P1-201ENST00000446295 882 ntBASIC18.02■□□□□ 0.48
POLR1BQ9H9Y6 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.02■□□□□ 0.48
POLR1BQ9H9Y6 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.02■□□□□ 0.48
POLR1BQ9H9Y6 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.02■□□□□ 0.48
POLR1BQ9H9Y6 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.02■□□□□ 0.48
POLR1BQ9H9Y6 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
POLR1BQ9H9Y6 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.02■□□□□ 0.48
POLR1BQ9H9Y6 AC024243.1-201ENST00000609234 778 ntBASIC18.02■□□□□ 0.48
POLR1BQ9H9Y6 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.02■□□□□ 0.48
POLR1BQ9H9Y6 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
POLR1BQ9H9Y6 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.02■□□□□ 0.48
POLR1BQ9H9Y6 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.02■□□□□ 0.48
POLR1BQ9H9Y6 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
POLR1BQ9H9Y6 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
POLR1BQ9H9Y6 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
POLR1BQ9H9Y6 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
POLR1BQ9H9Y6 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.02■□□□□ 0.47
POLR1BQ9H9Y6 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
POLR1BQ9H9Y6 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
POLR1BQ9H9Y6 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
POLR1BQ9H9Y6 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
POLR1BQ9H9Y6 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
POLR1BQ9H9Y6 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.01■□□□□ 0.47
POLR1BQ9H9Y6 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
POLR1BQ9H9Y6 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.01■□□□□ 0.47
POLR1BQ9H9Y6 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
POLR1BQ9H9Y6 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
POLR1BQ9H9Y6 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.01■□□□□ 0.47
POLR1BQ9H9Y6 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
POLR1BQ9H9Y6 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
POLR1BQ9H9Y6 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.01■□□□□ 0.47
POLR1BQ9H9Y6 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
POLR1BQ9H9Y6 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
POLR1BQ9H9Y6 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
POLR1BQ9H9Y6 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
POLR1BQ9H9Y6 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
POLR1BQ9H9Y6 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.01■□□□□ 0.47
POLR1BQ9H9Y6 AP002383.4-201ENST00000442518 975 ntBASIC18.01■□□□□ 0.47
POLR1BQ9H9Y6 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.01■□□□□ 0.47
POLR1BQ9H9Y6 UNC93B7-201ENST00000509439 705 ntBASIC18.01■□□□□ 0.47
POLR1BQ9H9Y6 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
POLR1BQ9H9Y6 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
POLR1BQ9H9Y6 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
POLR1BQ9H9Y6 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
POLR1BQ9H9Y6 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.01■□□□□ 0.47
POLR1BQ9H9Y6 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
POLR1BQ9H9Y6 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.01■□□□□ 0.47
POLR1BQ9H9Y6 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
POLR1BQ9H9Y6 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
POLR1BQ9H9Y6 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
POLR1BQ9H9Y6 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
POLR1BQ9H9Y6 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
POLR1BQ9H9Y6 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
POLR1BQ9H9Y6 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.01■□□□□ 0.47
POLR1BQ9H9Y6 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
POLR1BQ9H9Y6 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.01■□□□□ 0.47
POLR1BQ9H9Y6 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
POLR1BQ9H9Y6 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
POLR1BQ9H9Y6 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.01■□□□□ 0.47
POLR1BQ9H9Y6 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.01■□□□□ 0.47
POLR1BQ9H9Y6 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.01■□□□□ 0.47
POLR1BQ9H9Y6 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.01■□□□□ 0.47
POLR1BQ9H9Y6 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
POLR1BQ9H9Y6 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms