Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NELFAQ9H3P2 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
NELFAQ9H3P2 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.26■□□□□ 0.19
NELFAQ9H3P2 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.26■□□□□ 0.19
NELFAQ9H3P2 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.26■□□□□ 0.19
NELFAQ9H3P2 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.26■□□□□ 0.19
NELFAQ9H3P2 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
NELFAQ9H3P2 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
NELFAQ9H3P2 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NELFAQ9H3P2 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NELFAQ9H3P2 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NELFAQ9H3P2 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NELFAQ9H3P2 AL163051.1-201ENST00000569214 1512 ntBASIC16.25■□□□□ 0.19
NELFAQ9H3P2 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NELFAQ9H3P2 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.25■□□□□ 0.19
NELFAQ9H3P2 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NELFAQ9H3P2 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
NELFAQ9H3P2 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
NELFAQ9H3P2 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NELFAQ9H3P2 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NELFAQ9H3P2 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
NELFAQ9H3P2 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.25■□□□□ 0.19
NELFAQ9H3P2 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NELFAQ9H3P2 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NELFAQ9H3P2 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
NELFAQ9H3P2 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
NELFAQ9H3P2 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NELFAQ9H3P2 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.25■□□□□ 0.19
NELFAQ9H3P2 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
NELFAQ9H3P2 RNF152P1-201ENST00000397754 604 ntBASIC16.25■□□□□ 0.19
NELFAQ9H3P2 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NELFAQ9H3P2 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NELFAQ9H3P2 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
NELFAQ9H3P2 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NELFAQ9H3P2 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.25■□□□□ 0.19
NELFAQ9H3P2 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NELFAQ9H3P2 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.25■□□□□ 0.19
NELFAQ9H3P2 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NELFAQ9H3P2 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NELFAQ9H3P2 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NELFAQ9H3P2 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NELFAQ9H3P2 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NELFAQ9H3P2 AC063952.2-201ENST00000498792 1227 ntBASIC16.25■□□□□ 0.19
NELFAQ9H3P2 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.25■□□□□ 0.19
NELFAQ9H3P2 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.25■□□□□ 0.19
NELFAQ9H3P2 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.25■□□□□ 0.19
NELFAQ9H3P2 AC104390.1-201ENST00000555663 520 ntBASIC16.25■□□□□ 0.19
NELFAQ9H3P2 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.25■□□□□ 0.19
NELFAQ9H3P2 AL031432.5-201ENST00000641059 760 ntBASIC16.25■□□□□ 0.19
NELFAQ9H3P2 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NELFAQ9H3P2 AL390961.4-201ENST00000623958 2535 ntBASIC16.25■□□□□ 0.19
NELFAQ9H3P2 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
NELFAQ9H3P2 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.25■□□□□ 0.19
NELFAQ9H3P2 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NELFAQ9H3P2 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NELFAQ9H3P2 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NELFAQ9H3P2 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
NELFAQ9H3P2 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.25■□□□□ 0.19
NELFAQ9H3P2 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.25■□□□□ 0.19
NELFAQ9H3P2 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NELFAQ9H3P2 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NELFAQ9H3P2 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
NELFAQ9H3P2 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NELFAQ9H3P2 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NELFAQ9H3P2 AL354751.1-201ENST00000412768 1863 ntBASIC16.25■□□□□ 0.19
NELFAQ9H3P2 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NELFAQ9H3P2 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NELFAQ9H3P2 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
NELFAQ9H3P2 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.24■□□□□ 0.19
NELFAQ9H3P2 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NELFAQ9H3P2 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
NELFAQ9H3P2 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.24■□□□□ 0.19
NELFAQ9H3P2 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NELFAQ9H3P2 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NELFAQ9H3P2 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NELFAQ9H3P2 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NELFAQ9H3P2 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NELFAQ9H3P2 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NELFAQ9H3P2 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NELFAQ9H3P2 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.24■□□□□ 0.19
NELFAQ9H3P2 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NELFAQ9H3P2 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NELFAQ9H3P2 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NELFAQ9H3P2 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NELFAQ9H3P2 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NELFAQ9H3P2 TSPY5P-201ENST00000426936 936 ntBASIC16.24■□□□□ 0.19
NELFAQ9H3P2 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.24■□□□□ 0.19
NELFAQ9H3P2 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
NELFAQ9H3P2 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.24■□□□□ 0.19
NELFAQ9H3P2 AC140113.3-201ENST00000605663 199 ntBASIC16.24■□□□□ 0.19
NELFAQ9H3P2 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.24■□□□□ 0.19
NELFAQ9H3P2 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NELFAQ9H3P2 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NELFAQ9H3P2 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NELFAQ9H3P2 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NELFAQ9H3P2 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
NELFAQ9H3P2 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NELFAQ9H3P2 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.24■□□□□ 0.19
NELFAQ9H3P2 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
NELFAQ9H3P2 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms