Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF39Q9H2S5 BACE2-IT1-201ENST00000433378 382 ntTSL 5 BASIC20.28■□□□□ 0.84
RNF39Q9H2S5 MTND1P34-201ENST00000438556 671 ntBASIC20.28■□□□□ 0.84
RNF39Q9H2S5 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF39Q9H2S5 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF39Q9H2S5 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.28■□□□□ 0.84
RNF39Q9H2S5 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF39Q9H2S5 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF39Q9H2S5 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.28■□□□□ 0.84
RNF39Q9H2S5 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF39Q9H2S5 AC034232.1-201ENST00000506026 1064 ntBASIC20.28■□□□□ 0.84
RNF39Q9H2S5 AC105313.1-201ENST00000509121 353 ntBASIC20.28■□□□□ 0.84
RNF39Q9H2S5 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC20.28■□□□□ 0.84
RNF39Q9H2S5 AC027176.2-201ENST00000559166 746 ntBASIC20.28■□□□□ 0.84
RNF39Q9H2S5 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC20.28■□□□□ 0.84
RNF39Q9H2S5 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC20.28■□□□□ 0.84
RNF39Q9H2S5 CASC19-208ENST00000641056 1292 ntBASIC20.28■□□□□ 0.84
RNF39Q9H2S5 CASC19-227ENST00000641411 1285 ntBASIC20.28■□□□□ 0.84
RNF39Q9H2S5 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF39Q9H2S5 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
RNF39Q9H2S5 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.28■□□□□ 0.84
RNF39Q9H2S5 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
RNF39Q9H2S5 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RNF39Q9H2S5 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RNF39Q9H2S5 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF39Q9H2S5 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.84
RNF39Q9H2S5 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF39Q9H2S5 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF39Q9H2S5 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF39Q9H2S5 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF39Q9H2S5 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF39Q9H2S5 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF39Q9H2S5 MTND4LP20-201ENST00000402379 270 ntBASIC20.27■□□□□ 0.84
RNF39Q9H2S5 KRT18P23-201ENST00000435622 1283 ntBASIC20.27■□□□□ 0.84
RNF39Q9H2S5 AL162253.1-201ENST00000443792 758 ntTSL 3 BASIC20.27■□□□□ 0.84
RNF39Q9H2S5 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC20.27■□□□□ 0.84
RNF39Q9H2S5 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.27■□□□□ 0.84
RNF39Q9H2S5 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.27■□□□□ 0.84
RNF39Q9H2S5 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.27■□□□□ 0.84
RNF39Q9H2S5 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC20.27■□□□□ 0.84
RNF39Q9H2S5 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.27■□□□□ 0.84
RNF39Q9H2S5 AP003399.1-201ENST00000637534 361 ntBASIC20.27■□□□□ 0.84
RNF39Q9H2S5 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF39Q9H2S5 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RNF39Q9H2S5 AL049812.1-201ENST00000432563 2267 ntBASIC20.27■□□□□ 0.83
RNF39Q9H2S5 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
RNF39Q9H2S5 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF39Q9H2S5 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF39Q9H2S5 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
RNF39Q9H2S5 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF39Q9H2S5 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.26■□□□□ 0.83
RNF39Q9H2S5 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.26■□□□□ 0.83
RNF39Q9H2S5 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF39Q9H2S5 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.26■□□□□ 0.83
RNF39Q9H2S5 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RNF39Q9H2S5 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF39Q9H2S5 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF39Q9H2S5 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.26■□□□□ 0.83
RNF39Q9H2S5 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF39Q9H2S5 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF39Q9H2S5 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC20.26■□□□□ 0.83
RNF39Q9H2S5 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.26■□□□□ 0.83
RNF39Q9H2S5 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RNF39Q9H2S5 FAM92A-204ENST00000517718 827 ntTSL 3 BASIC20.26■□□□□ 0.83
RNF39Q9H2S5 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC20.26■□□□□ 0.83
RNF39Q9H2S5 AL110292.1-201ENST00000550024 477 ntTSL 3 BASIC20.26■□□□□ 0.83
RNF39Q9H2S5 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC20.26■□□□□ 0.83
RNF39Q9H2S5 AP000350.5-201ENST00000609825 613 ntBASIC20.26■□□□□ 0.83
RNF39Q9H2S5 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RNF39Q9H2S5 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF39Q9H2S5 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.26■□□□□ 0.83
RNF39Q9H2S5 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF39Q9H2S5 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
RNF39Q9H2S5 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF39Q9H2S5 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.26■□□□□ 0.83
RNF39Q9H2S5 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
RNF39Q9H2S5 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
RNF39Q9H2S5 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF39Q9H2S5 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF39Q9H2S5 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF39Q9H2S5 FAM221A-201ENST00000344962 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF39Q9H2S5 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF39Q9H2S5 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.25■□□□□ 0.83
RNF39Q9H2S5 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF39Q9H2S5 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
RNF39Q9H2S5 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.25■□□□□ 0.83
RNF39Q9H2S5 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF39Q9H2S5 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF39Q9H2S5 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC20.25■□□□□ 0.83
RNF39Q9H2S5 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF39Q9H2S5 RANP7-201ENST00000418085 644 ntBASIC20.25■□□□□ 0.83
RNF39Q9H2S5 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC20.25■□□□□ 0.83
RNF39Q9H2S5 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF39Q9H2S5 MED6P1-201ENST00000439659 713 ntBASIC20.25■□□□□ 0.83
RNF39Q9H2S5 AL591503.2-201ENST00000442314 1005 ntBASIC20.25■□□□□ 0.83
RNF39Q9H2S5 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RNF39Q9H2S5 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC20.25■□□□□ 0.83
RNF39Q9H2S5 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RNF39Q9H2S5 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.25■□□□□ 0.83
RNF39Q9H2S5 MIR3917-201ENST00000580971 93 ntBASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms