Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
POLR2J3Q9H1A7 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
POLR2J3Q9H1A7 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
POLR2J3Q9H1A7 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
POLR2J3Q9H1A7 PRORSD1P-201ENST00000295112 541 ntBASIC16.86■□□□□ 0.29
POLR2J3Q9H1A7 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
POLR2J3Q9H1A7 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
POLR2J3Q9H1A7 SLC25A1P2-201ENST00000430693 912 ntBASIC16.86■□□□□ 0.29
POLR2J3Q9H1A7 AL355355.2-201ENST00000442321 338 ntBASIC16.86■□□□□ 0.29
POLR2J3Q9H1A7 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.86■□□□□ 0.29
POLR2J3Q9H1A7 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
POLR2J3Q9H1A7 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.86■□□□□ 0.29
POLR2J3Q9H1A7 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC16.86■□□□□ 0.29
POLR2J3Q9H1A7 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC16.86■□□□□ 0.29
POLR2J3Q9H1A7 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.86■□□□□ 0.29
POLR2J3Q9H1A7 REXO1L10P-201ENST00000615707 1290 ntBASIC16.86■□□□□ 0.29
POLR2J3Q9H1A7 REXO1L12P-201ENST00000622156 912 ntBASIC16.86■□□□□ 0.29
POLR2J3Q9H1A7 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.86■□□□□ 0.29
POLR2J3Q9H1A7 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.86■□□□□ 0.29
POLR2J3Q9H1A7 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
POLR2J3Q9H1A7 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
POLR2J3Q9H1A7 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
POLR2J3Q9H1A7 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.86■□□□□ 0.29
POLR2J3Q9H1A7 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
POLR2J3Q9H1A7 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
POLR2J3Q9H1A7 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
POLR2J3Q9H1A7 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
POLR2J3Q9H1A7 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
POLR2J3Q9H1A7 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
POLR2J3Q9H1A7 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
POLR2J3Q9H1A7 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
POLR2J3Q9H1A7 AC009102.3-201ENST00000623118 1491 ntBASIC16.86■□□□□ 0.29
POLR2J3Q9H1A7 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
POLR2J3Q9H1A7 AL163051.1-201ENST00000569214 1512 ntBASIC16.86■□□□□ 0.29
POLR2J3Q9H1A7 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
POLR2J3Q9H1A7 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.85■□□□□ 0.29
POLR2J3Q9H1A7 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
POLR2J3Q9H1A7 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.85■□□□□ 0.29
POLR2J3Q9H1A7 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.85■□□□□ 0.29
POLR2J3Q9H1A7 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
POLR2J3Q9H1A7 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
POLR2J3Q9H1A7 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.85■□□□□ 0.29
POLR2J3Q9H1A7 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
POLR2J3Q9H1A7 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
POLR2J3Q9H1A7 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
POLR2J3Q9H1A7 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
POLR2J3Q9H1A7 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.85■□□□□ 0.29
POLR2J3Q9H1A7 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
POLR2J3Q9H1A7 CRYGFP-201ENST00000418459 633 ntBASIC16.85■□□□□ 0.29
POLR2J3Q9H1A7 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
POLR2J3Q9H1A7 GCSHP5-201ENST00000443090 522 ntBASIC16.85■□□□□ 0.29
POLR2J3Q9H1A7 TSPY17P-201ENST00000450329 467 ntBASIC16.85■□□□□ 0.29
POLR2J3Q9H1A7 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
POLR2J3Q9H1A7 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.85■□□□□ 0.29
POLR2J3Q9H1A7 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.85■□□□□ 0.29
POLR2J3Q9H1A7 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.85■□□□□ 0.29
POLR2J3Q9H1A7 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.85■□□□□ 0.29
POLR2J3Q9H1A7 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.85■□□□□ 0.29
POLR2J3Q9H1A7 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.85■□□□□ 0.29
POLR2J3Q9H1A7 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC16.85■□□□□ 0.29
POLR2J3Q9H1A7 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
POLR2J3Q9H1A7 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
POLR2J3Q9H1A7 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
POLR2J3Q9H1A7 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
POLR2J3Q9H1A7 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
POLR2J3Q9H1A7 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
POLR2J3Q9H1A7 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
POLR2J3Q9H1A7 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.85■□□□□ 0.29
POLR2J3Q9H1A7 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.85■□□□□ 0.29
POLR2J3Q9H1A7 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
POLR2J3Q9H1A7 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.85■□□□□ 0.29
POLR2J3Q9H1A7 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
POLR2J3Q9H1A7 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
POLR2J3Q9H1A7 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
POLR2J3Q9H1A7 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
POLR2J3Q9H1A7 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
POLR2J3Q9H1A7 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
POLR2J3Q9H1A7 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
POLR2J3Q9H1A7 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
POLR2J3Q9H1A7 WWOX-216ENST00000569818 525 ntBASIC16.84■□□□□ 0.29
POLR2J3Q9H1A7 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.84■□□□□ 0.29
POLR2J3Q9H1A7 MIR3180-4-201ENST00000582223 153 ntBASIC16.84■□□□□ 0.29
POLR2J3Q9H1A7 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.84■□□□□ 0.29
POLR2J3Q9H1A7 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
POLR2J3Q9H1A7 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
POLR2J3Q9H1A7 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
POLR2J3Q9H1A7 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
POLR2J3Q9H1A7 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.84■□□□□ 0.29
POLR2J3Q9H1A7 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.84■□□□□ 0.29
POLR2J3Q9H1A7 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
POLR2J3Q9H1A7 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
POLR2J3Q9H1A7 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
POLR2J3Q9H1A7 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
POLR2J3Q9H1A7 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
POLR2J3Q9H1A7 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.83■□□□□ 0.29
POLR2J3Q9H1A7 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
POLR2J3Q9H1A7 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
POLR2J3Q9H1A7 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
POLR2J3Q9H1A7 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
POLR2J3Q9H1A7 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms