Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
UBE2OQ9C0C9 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
UBE2OQ9C0C9 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBE2OQ9C0C9 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
UBE2OQ9C0C9 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
UBE2OQ9C0C9 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBE2OQ9C0C9 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
UBE2OQ9C0C9 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBE2OQ9C0C9 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBE2OQ9C0C9 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC20.03■□□□□ 0.8
UBE2OQ9C0C9 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
UBE2OQ9C0C9 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC20.03■□□□□ 0.8
UBE2OQ9C0C9 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBE2OQ9C0C9 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBE2OQ9C0C9 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBE2OQ9C0C9 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBE2OQ9C0C9 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.03■□□□□ 0.8
UBE2OQ9C0C9 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBE2OQ9C0C9 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.02■□□□□ 0.8
UBE2OQ9C0C9 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
UBE2OQ9C0C9 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
UBE2OQ9C0C9 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
UBE2OQ9C0C9 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.02■□□□□ 0.8
UBE2OQ9C0C9 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.02■□□□□ 0.8
UBE2OQ9C0C9 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.02■□□□□ 0.8
UBE2OQ9C0C9 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
UBE2OQ9C0C9 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.02■□□□□ 0.8
UBE2OQ9C0C9 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
UBE2OQ9C0C9 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
UBE2OQ9C0C9 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
UBE2OQ9C0C9 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
UBE2OQ9C0C9 MIR770-201ENST00000390219 98 ntBASIC20.02■□□□□ 0.8
UBE2OQ9C0C9 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
UBE2OQ9C0C9 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
UBE2OQ9C0C9 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.02■□□□□ 0.8
UBE2OQ9C0C9 CFL1-202ENST00000524553 860 ntTSL 2 BASIC20.02■□□□□ 0.8
UBE2OQ9C0C9 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC20.02■□□□□ 0.8
UBE2OQ9C0C9 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC20.02■□□□□ 0.8
UBE2OQ9C0C9 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC20.02■□□□□ 0.8
UBE2OQ9C0C9 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC20.02■□□□□ 0.8
UBE2OQ9C0C9 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.02■□□□□ 0.8
UBE2OQ9C0C9 AC008735.5-201ENST00000623544 497 ntBASIC20.02■□□□□ 0.8
UBE2OQ9C0C9 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
UBE2OQ9C0C9 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
UBE2OQ9C0C9 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
UBE2OQ9C0C9 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
UBE2OQ9C0C9 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
UBE2OQ9C0C9 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
UBE2OQ9C0C9 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
UBE2OQ9C0C9 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
UBE2OQ9C0C9 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
UBE2OQ9C0C9 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
UBE2OQ9C0C9 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
UBE2OQ9C0C9 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
UBE2OQ9C0C9 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
UBE2OQ9C0C9 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
UBE2OQ9C0C9 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBE2OQ9C0C9 AL512353.2-201ENST00000448759 1962 ntBASIC20.01■□□□□ 0.79
UBE2OQ9C0C9 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBE2OQ9C0C9 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBE2OQ9C0C9 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
UBE2OQ9C0C9 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBE2OQ9C0C9 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
UBE2OQ9C0C9 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBE2OQ9C0C9 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.01■□□□□ 0.79
UBE2OQ9C0C9 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
UBE2OQ9C0C9 PNMT-202ENST00000394246 821 ntTSL 2 BASIC20.01■□□□□ 0.79
UBE2OQ9C0C9 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.01■□□□□ 0.79
UBE2OQ9C0C9 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC20.01■□□□□ 0.79
UBE2OQ9C0C9 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC20.01■□□□□ 0.79
UBE2OQ9C0C9 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
UBE2OQ9C0C9 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC20.01■□□□□ 0.79
UBE2OQ9C0C9 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
UBE2OQ9C0C9 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC20.01■□□□□ 0.79
UBE2OQ9C0C9 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.01■□□□□ 0.79
UBE2OQ9C0C9 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC20.01■□□□□ 0.79
UBE2OQ9C0C9 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.01■□□□□ 0.79
UBE2OQ9C0C9 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
UBE2OQ9C0C9 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.01■□□□□ 0.79
UBE2OQ9C0C9 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBE2OQ9C0C9 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
UBE2OQ9C0C9 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBE2OQ9C0C9 AC034236.2-201ENST00000606662 1610 ntBASIC20.01■□□□□ 0.79
UBE2OQ9C0C9 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
UBE2OQ9C0C9 AP005117.1-201ENST00000584346 1413 ntBASIC20.01■□□□□ 0.79
UBE2OQ9C0C9 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBE2OQ9C0C9 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.01■□□□□ 0.79
UBE2OQ9C0C9 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20■□□□□ 0.79
UBE2OQ9C0C9 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20■□□□□ 0.79
UBE2OQ9C0C9 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20■□□□□ 0.79
UBE2OQ9C0C9 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20■□□□□ 0.79
UBE2OQ9C0C9 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
UBE2OQ9C0C9 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20■□□□□ 0.79
UBE2OQ9C0C9 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
UBE2OQ9C0C9 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20■□□□□ 0.79
UBE2OQ9C0C9 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
UBE2OQ9C0C9 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
UBE2OQ9C0C9 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC20■□□□□ 0.79
UBE2OQ9C0C9 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
UBE2OQ9C0C9 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms