Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.06■□□□□ 0.32
AMBRA1Q9C0C7 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AMBRA1Q9C0C7 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AMBRA1Q9C0C7 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
AMBRA1Q9C0C7 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.06■□□□□ 0.32
AMBRA1Q9C0C7 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AMBRA1Q9C0C7 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AMBRA1Q9C0C7 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
AMBRA1Q9C0C7 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
AMBRA1Q9C0C7 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
AMBRA1Q9C0C7 KRT17P2-201ENST00000300992 1314 ntBASIC17.06■□□□□ 0.32
AMBRA1Q9C0C7 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
AMBRA1Q9C0C7 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.06■□□□□ 0.32
AMBRA1Q9C0C7 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AMBRA1Q9C0C7 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
AMBRA1Q9C0C7 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AMBRA1Q9C0C7 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AMBRA1Q9C0C7 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.06■□□□□ 0.32
AMBRA1Q9C0C7 TSPY7P-201ENST00000431358 1114 ntBASIC17.06■□□□□ 0.32
AMBRA1Q9C0C7 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AMBRA1Q9C0C7 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.06■□□□□ 0.32
AMBRA1Q9C0C7 B3GAT3P1-201ENST00000471720 806 ntBASIC17.06■□□□□ 0.32
AMBRA1Q9C0C7 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.06■□□□□ 0.32
AMBRA1Q9C0C7 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.06■□□□□ 0.32
AMBRA1Q9C0C7 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.06■□□□□ 0.32
AMBRA1Q9C0C7 LINC01023-201ENST00000606054 436 ntBASIC17.06■□□□□ 0.32
AMBRA1Q9C0C7 AC010331.1-201ENST00000611423 582 ntBASIC17.06■□□□□ 0.32
AMBRA1Q9C0C7 MIR6786-201ENST00000616843 113 ntBASIC17.06■□□□□ 0.32
AMBRA1Q9C0C7 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.06■□□□□ 0.32
AMBRA1Q9C0C7 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.06■□□□□ 0.32
AMBRA1Q9C0C7 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AMBRA1Q9C0C7 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
AMBRA1Q9C0C7 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.06■□□□□ 0.32
AMBRA1Q9C0C7 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
AMBRA1Q9C0C7 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
AMBRA1Q9C0C7 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
AMBRA1Q9C0C7 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AMBRA1Q9C0C7 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.06■□□□□ 0.32
AMBRA1Q9C0C7 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
AMBRA1Q9C0C7 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
AMBRA1Q9C0C7 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
AMBRA1Q9C0C7 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
AMBRA1Q9C0C7 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
AMBRA1Q9C0C7 AD000864.1-201ENST00000624076 2295 ntBASIC17.05■□□□□ 0.32
AMBRA1Q9C0C7 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.05■□□□□ 0.32
AMBRA1Q9C0C7 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AMBRA1Q9C0C7 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.05■□□□□ 0.32
AMBRA1Q9C0C7 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AMBRA1Q9C0C7 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.05■□□□□ 0.32
AMBRA1Q9C0C7 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
AMBRA1Q9C0C7 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AMBRA1Q9C0C7 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
AMBRA1Q9C0C7 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.05■□□□□ 0.32
AMBRA1Q9C0C7 MIR564-202ENST00000385049 94 ntBASIC17.05■□□□□ 0.32
AMBRA1Q9C0C7 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.05■□□□□ 0.32
AMBRA1Q9C0C7 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AMBRA1Q9C0C7 FAM197Y1-201ENST00000421178 764 ntBASIC17.05■□□□□ 0.32
AMBRA1Q9C0C7 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.05■□□□□ 0.32
AMBRA1Q9C0C7 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
AMBRA1Q9C0C7 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.05■□□□□ 0.32
AMBRA1Q9C0C7 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AMBRA1Q9C0C7 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AMBRA1Q9C0C7 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
AMBRA1Q9C0C7 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
AMBRA1Q9C0C7 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AMBRA1Q9C0C7 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
AMBRA1Q9C0C7 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.05■□□□□ 0.32
AMBRA1Q9C0C7 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AMBRA1Q9C0C7 AC022211.2-201ENST00000585075 2527 ntBASIC17.05■□□□□ 0.32
AMBRA1Q9C0C7 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
AMBRA1Q9C0C7 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
AMBRA1Q9C0C7 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AMBRA1Q9C0C7 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
AMBRA1Q9C0C7 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
AMBRA1Q9C0C7 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AMBRA1Q9C0C7 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AMBRA1Q9C0C7 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
AMBRA1Q9C0C7 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
AMBRA1Q9C0C7 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.04■□□□□ 0.32
AMBRA1Q9C0C7 AL096828.2-201ENST00000567259 1965 ntBASIC17.04■□□□□ 0.32
AMBRA1Q9C0C7 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
AMBRA1Q9C0C7 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
AMBRA1Q9C0C7 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.04■□□□□ 0.32
AMBRA1Q9C0C7 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
AMBRA1Q9C0C7 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
AMBRA1Q9C0C7 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
AMBRA1Q9C0C7 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
AMBRA1Q9C0C7 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
AMBRA1Q9C0C7 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
AMBRA1Q9C0C7 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.04■□□□□ 0.32
AMBRA1Q9C0C7 MESTP1-201ENST00000404287 994 ntBASIC17.04■□□□□ 0.32
AMBRA1Q9C0C7 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
AMBRA1Q9C0C7 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
AMBRA1Q9C0C7 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.04■□□□□ 0.32
AMBRA1Q9C0C7 NUDT16P1-203ENST00000513809 620 ntBASIC17.04■□□□□ 0.32
AMBRA1Q9C0C7 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.04■□□□□ 0.32
AMBRA1Q9C0C7 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.04■□□□□ 0.32
AMBRA1Q9C0C7 AC026471.5-201ENST00000615068 467 ntBASIC17.04■□□□□ 0.32
AMBRA1Q9C0C7 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
AMBRA1Q9C0C7 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms