Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 AC009102.3-201ENST00000623118 1491 ntBASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 DFFB-203ENST00000341385 572 ntTSL 5 BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 TSPY12P-201ENST00000421279 868 ntBASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 AC104819.1-201ENST00000504587 486 ntBASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 AC079776.4-201ENST00000511039 504 ntBASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 AF238378.1-201ENST00000526806 358 ntBASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 ABR-204ENST00000543210 1049 ntTSL 2 BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 AC091304.2-201ENST00000564639 760 ntBASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 AC005336.2-201ENST00000593183 939 ntBASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 GXYLT1P4-201ENST00000613576 1192 ntBASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 AC148477.8-201ENST00000624298 468 ntBASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 TNXA-203ENST00000507684 2038 ntBASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
KRTAP4-3Q9BYR4 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 KRT8P10-201ENST00000450021 1447 ntBASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 AC132938.6-201ENST00000623828 1655 ntBASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 AC009113.1-201ENST00000570267 2443 ntBASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms