Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 AL031133.1-201ENST00000406807 723 ntBASIC16.31■□□□□ 0.2
TRAF4Q9BUZ4 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.31■□□□□ 0.2
TRAF4Q9BUZ4 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.31■□□□□ 0.2
TRAF4Q9BUZ4 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.31■□□□□ 0.2
TRAF4Q9BUZ4 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.31■□□□□ 0.2
TRAF4Q9BUZ4 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.31■□□□□ 0.2
TRAF4Q9BUZ4 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.31■□□□□ 0.2
TRAF4Q9BUZ4 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.31■□□□□ 0.2
TRAF4Q9BUZ4 AC091076.1-201ENST00000610741 619 ntBASIC16.31■□□□□ 0.2
TRAF4Q9BUZ4 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAF4Q9BUZ4 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAF4Q9BUZ4 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAF4Q9BUZ4 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.31■□□□□ 0.2
TRAF4Q9BUZ4 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.31■□□□□ 0.2
TRAF4Q9BUZ4 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAF4Q9BUZ4 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAF4Q9BUZ4 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAF4Q9BUZ4 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAF4Q9BUZ4 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAF4Q9BUZ4 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TRAF4Q9BUZ4 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.3■□□□□ 0.2
TRAF4Q9BUZ4 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TRAF4Q9BUZ4 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAF4Q9BUZ4 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAF4Q9BUZ4 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAF4Q9BUZ4 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAF4Q9BUZ4 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAF4Q9BUZ4 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAF4Q9BUZ4 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAF4Q9BUZ4 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
TRAF4Q9BUZ4 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.3■□□□□ 0.2
TRAF4Q9BUZ4 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
TRAF4Q9BUZ4 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAF4Q9BUZ4 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAF4Q9BUZ4 HOMER2P1-201ENST00000455653 964 ntBASIC16.3■□□□□ 0.2
TRAF4Q9BUZ4 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.3■□□□□ 0.2
TRAF4Q9BUZ4 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.3■□□□□ 0.2
TRAF4Q9BUZ4 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.3■□□□□ 0.2
TRAF4Q9BUZ4 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.3■□□□□ 0.2
TRAF4Q9BUZ4 AC140113.3-201ENST00000605663 199 ntBASIC16.3■□□□□ 0.2
TRAF4Q9BUZ4 AL358472.4-201ENST00000633140 710 ntBASIC16.3■□□□□ 0.2
TRAF4Q9BUZ4 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
TRAF4Q9BUZ4 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.3■□□□□ 0.2
TRAF4Q9BUZ4 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAF4Q9BUZ4 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAF4Q9BUZ4 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
TRAF4Q9BUZ4 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.3■□□□□ 0.2
TRAF4Q9BUZ4 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAF4Q9BUZ4 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TRAF4Q9BUZ4 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAF4Q9BUZ4 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
TRAF4Q9BUZ4 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAF4Q9BUZ4 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAF4Q9BUZ4 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAF4Q9BUZ4 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TRAF4Q9BUZ4 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRAF4Q9BUZ4 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAF4Q9BUZ4 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRAF4Q9BUZ4 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.29■□□□□ 0.2
TRAF4Q9BUZ4 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.29■□□□□ 0.2
TRAF4Q9BUZ4 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.29■□□□□ 0.2
TRAF4Q9BUZ4 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.29■□□□□ 0.2
TRAF4Q9BUZ4 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRAF4Q9BUZ4 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.29■□□□□ 0.2
TRAF4Q9BUZ4 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRAF4Q9BUZ4 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.29■□□□□ 0.2
TRAF4Q9BUZ4 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.29■□□□□ 0.2
TRAF4Q9BUZ4 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAF4Q9BUZ4 AL023973.1-201ENST00000624619 620 ntBASIC16.29■□□□□ 0.2
TRAF4Q9BUZ4 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.29■□□□□ 0.2
TRAF4Q9BUZ4 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TRAF4Q9BUZ4 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TRAF4Q9BUZ4 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.29■□□□□ 0.2
TRAF4Q9BUZ4 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TRAF4Q9BUZ4 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.29■□□□□ 0.2
TRAF4Q9BUZ4 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAF4Q9BUZ4 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
TRAF4Q9BUZ4 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TRAF4Q9BUZ4 KRT8P45-201ENST00000414328 1447 ntBASIC16.28■□□□□ 0.2
TRAF4Q9BUZ4 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAF4Q9BUZ4 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAF4Q9BUZ4 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAF4Q9BUZ4 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAF4Q9BUZ4 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.28■□□□□ 0.2
TRAF4Q9BUZ4 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TRAF4Q9BUZ4 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAF4Q9BUZ4 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAF4Q9BUZ4 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.28■□□□□ 0.2
TRAF4Q9BUZ4 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAF4Q9BUZ4 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAF4Q9BUZ4 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TRAF4Q9BUZ4 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.28■□□□□ 0.2
TRAF4Q9BUZ4 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAF4Q9BUZ4 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRAF4Q9BUZ4 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TRAF4Q9BUZ4 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.28■□□□□ 0.2
TRAF4Q9BUZ4 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.28■□□□□ 0.2
TRAF4Q9BUZ4 AL441883.1-201ENST00000566170 1045 ntBASIC16.28■□□□□ 0.2
TRAF4Q9BUZ4 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAF4Q9BUZ4 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms