Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC15.4■□□□□ 0.06
HDHD3Q9BSH5 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
HDHD3Q9BSH5 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC15.4■□□□□ 0.06
HDHD3Q9BSH5 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC15.4■□□□□ 0.06
HDHD3Q9BSH5 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
HDHD3Q9BSH5 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
HDHD3Q9BSH5 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.4■□□□□ 0.06
HDHD3Q9BSH5 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HDHD3Q9BSH5 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HDHD3Q9BSH5 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HDHD3Q9BSH5 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HDHD3Q9BSH5 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HDHD3Q9BSH5 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HDHD3Q9BSH5 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.4■□□□□ 0.06
HDHD3Q9BSH5 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HDHD3Q9BSH5 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.4■□□□□ 0.06
HDHD3Q9BSH5 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC15.4■□□□□ 0.06
HDHD3Q9BSH5 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HDHD3Q9BSH5 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.39■□□□□ 0.06
HDHD3Q9BSH5 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HDHD3Q9BSH5 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
HDHD3Q9BSH5 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.39■□□□□ 0.05
HDHD3Q9BSH5 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
HDHD3Q9BSH5 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC15.39■□□□□ 0.05
HDHD3Q9BSH5 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
HDHD3Q9BSH5 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
HDHD3Q9BSH5 AL645608.8-201ENST00000606034 2086 ntBASIC15.39■□□□□ 0.05
HDHD3Q9BSH5 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
HDHD3Q9BSH5 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
HDHD3Q9BSH5 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HDHD3Q9BSH5 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HDHD3Q9BSH5 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.39■□□□□ 0.05
HDHD3Q9BSH5 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HDHD3Q9BSH5 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC15.39■□□□□ 0.05
HDHD3Q9BSH5 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC15.39■□□□□ 0.05
HDHD3Q9BSH5 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC15.39■□□□□ 0.05
HDHD3Q9BSH5 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC15.39■□□□□ 0.05
HDHD3Q9BSH5 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC15.39■□□□□ 0.05
HDHD3Q9BSH5 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC15.39■□□□□ 0.05
HDHD3Q9BSH5 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15.39■□□□□ 0.05
HDHD3Q9BSH5 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HDHD3Q9BSH5 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HDHD3Q9BSH5 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HDHD3Q9BSH5 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HDHD3Q9BSH5 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
HDHD3Q9BSH5 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
HDHD3Q9BSH5 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HDHD3Q9BSH5 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
HDHD3Q9BSH5 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
HDHD3Q9BSH5 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC15.39■□□□□ 0.05
HDHD3Q9BSH5 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HDHD3Q9BSH5 AC080080.1-201ENST00000625121 2420 ntBASIC15.38■□□□□ 0.05
HDHD3Q9BSH5 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
HDHD3Q9BSH5 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
HDHD3Q9BSH5 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.38■□□□□ 0.05
HDHD3Q9BSH5 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HDHD3Q9BSH5 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
HDHD3Q9BSH5 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HDHD3Q9BSH5 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.38■□□□□ 0.05
HDHD3Q9BSH5 AL163051.1-201ENST00000569214 1512 ntBASIC15.38■□□□□ 0.05
HDHD3Q9BSH5 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
HDHD3Q9BSH5 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.38■□□□□ 0.05
HDHD3Q9BSH5 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
HDHD3Q9BSH5 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HDHD3Q9BSH5 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HDHD3Q9BSH5 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
HDHD3Q9BSH5 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.38■□□□□ 0.05
HDHD3Q9BSH5 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
HDHD3Q9BSH5 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC15.38■□□□□ 0.05
HDHD3Q9BSH5 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
HDHD3Q9BSH5 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HDHD3Q9BSH5 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HDHD3Q9BSH5 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HDHD3Q9BSH5 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
HDHD3Q9BSH5 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC15.38■□□□□ 0.05
HDHD3Q9BSH5 AC097488.1-201ENST00000507834 756 ntBASIC15.38■□□□□ 0.05
HDHD3Q9BSH5 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
HDHD3Q9BSH5 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC15.38■□□□□ 0.05
HDHD3Q9BSH5 GRAP-204ENST00000573099 846 ntTSL 3 BASIC15.38■□□□□ 0.05
HDHD3Q9BSH5 MIR3180-5-201ENST00000583743 153 ntBASIC15.38■□□□□ 0.05
HDHD3Q9BSH5 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC15.38■□□□□ 0.05
HDHD3Q9BSH5 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC15.38■□□□□ 0.05
HDHD3Q9BSH5 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HDHD3Q9BSH5 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HDHD3Q9BSH5 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
HDHD3Q9BSH5 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC15.38■□□□□ 0.05
HDHD3Q9BSH5 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.38■□□□□ 0.05
HDHD3Q9BSH5 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.38■□□□□ 0.05
HDHD3Q9BSH5 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC15.38■□□□□ 0.05
HDHD3Q9BSH5 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.38■□□□□ 0.05
HDHD3Q9BSH5 AC009102.3-201ENST00000623118 1491 ntBASIC15.38■□□□□ 0.05
HDHD3Q9BSH5 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
HDHD3Q9BSH5 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
HDHD3Q9BSH5 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
HDHD3Q9BSH5 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
HDHD3Q9BSH5 PKD1P1-201ENST00000458669 6805 ntBASIC15.38■□□□□ 0.05
HDHD3Q9BSH5 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
HDHD3Q9BSH5 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HDHD3Q9BSH5 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HDHD3Q9BSH5 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms