Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.38■□□□□ 0.69
PAAF1Q9BRP4 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.38■□□□□ 0.69
PAAF1Q9BRP4 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
PAAF1Q9BRP4 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.38■□□□□ 0.69
PAAF1Q9BRP4 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PAAF1Q9BRP4 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.38■□□□□ 0.69
PAAF1Q9BRP4 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
PAAF1Q9BRP4 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
PAAF1Q9BRP4 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.37■□□□□ 0.69
PAAF1Q9BRP4 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.37■□□□□ 0.69
PAAF1Q9BRP4 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
PAAF1Q9BRP4 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PAAF1Q9BRP4 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PAAF1Q9BRP4 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PAAF1Q9BRP4 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PAAF1Q9BRP4 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PAAF1Q9BRP4 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PAAF1Q9BRP4 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.37■□□□□ 0.69
PAAF1Q9BRP4 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PAAF1Q9BRP4 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.37■□□□□ 0.69
PAAF1Q9BRP4 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PAAF1Q9BRP4 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
PAAF1Q9BRP4 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC19.37■□□□□ 0.69
PAAF1Q9BRP4 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC19.37■□□□□ 0.69
PAAF1Q9BRP4 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.37■□□□□ 0.69
PAAF1Q9BRP4 AC132008.2-207ENST00000454517 770 ntBASIC19.37■□□□□ 0.69
PAAF1Q9BRP4 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.37■□□□□ 0.69
PAAF1Q9BRP4 AC106795.1-205ENST00000512851 1056 ntBASIC19.37■□□□□ 0.69
PAAF1Q9BRP4 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.37■□□□□ 0.69
PAAF1Q9BRP4 AL138831.2-201ENST00000606564 490 ntBASIC19.37■□□□□ 0.69
PAAF1Q9BRP4 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PAAF1Q9BRP4 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PAAF1Q9BRP4 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PAAF1Q9BRP4 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PAAF1Q9BRP4 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.37■□□□□ 0.69
PAAF1Q9BRP4 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
PAAF1Q9BRP4 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PAAF1Q9BRP4 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
PAAF1Q9BRP4 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PAAF1Q9BRP4 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PAAF1Q9BRP4 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PAAF1Q9BRP4 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PAAF1Q9BRP4 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PAAF1Q9BRP4 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PAAF1Q9BRP4 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.36■□□□□ 0.69
PAAF1Q9BRP4 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
PAAF1Q9BRP4 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.36■□□□□ 0.69
PAAF1Q9BRP4 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PAAF1Q9BRP4 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PAAF1Q9BRP4 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
PAAF1Q9BRP4 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PAAF1Q9BRP4 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PAAF1Q9BRP4 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.36■□□□□ 0.69
PAAF1Q9BRP4 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC19.36■□□□□ 0.69
PAAF1Q9BRP4 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.36■□□□□ 0.69
PAAF1Q9BRP4 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.36■□□□□ 0.69
PAAF1Q9BRP4 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.36■□□□□ 0.69
PAAF1Q9BRP4 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.36■□□□□ 0.69
PAAF1Q9BRP4 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PAAF1Q9BRP4 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PAAF1Q9BRP4 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PAAF1Q9BRP4 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
PAAF1Q9BRP4 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PAAF1Q9BRP4 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.36■□□□□ 0.69
PAAF1Q9BRP4 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PAAF1Q9BRP4 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.36■□□□□ 0.69
PAAF1Q9BRP4 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
PAAF1Q9BRP4 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PAAF1Q9BRP4 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PAAF1Q9BRP4 AC125634.1-201ENST00000438758 1403 ntBASIC19.35■□□□□ 0.69
PAAF1Q9BRP4 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.35■□□□□ 0.69
PAAF1Q9BRP4 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PAAF1Q9BRP4 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
PAAF1Q9BRP4 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PAAF1Q9BRP4 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
PAAF1Q9BRP4 THAP5-204ENST00000438865 868 ntTSL 2 BASIC19.35■□□□□ 0.69
PAAF1Q9BRP4 KRT18P65-201ENST00000439811 1286 ntBASIC19.35■□□□□ 0.69
PAAF1Q9BRP4 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PAAF1Q9BRP4 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.35■□□□□ 0.69
PAAF1Q9BRP4 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.35■□□□□ 0.69
PAAF1Q9BRP4 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
PAAF1Q9BRP4 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.35■□□□□ 0.69
PAAF1Q9BRP4 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.35■□□□□ 0.69
PAAF1Q9BRP4 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.35■□□□□ 0.69
PAAF1Q9BRP4 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
PAAF1Q9BRP4 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
PAAF1Q9BRP4 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
PAAF1Q9BRP4 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PAAF1Q9BRP4 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.35■□□□□ 0.69
PAAF1Q9BRP4 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PAAF1Q9BRP4 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.35■□□□□ 0.69
PAAF1Q9BRP4 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC19.35■□□□□ 0.69
PAAF1Q9BRP4 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PAAF1Q9BRP4 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PAAF1Q9BRP4 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PAAF1Q9BRP4 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PAAF1Q9BRP4 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.34■□□□□ 0.69
PAAF1Q9BRP4 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PAAF1Q9BRP4 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PAAF1Q9BRP4 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms