Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 HYI-210ENST00000486909 905 ntTSL 5 BASIC12.72□□□□□ -0.37
VPS25Q9BRG1 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VPS25Q9BRG1 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VPS25Q9BRG1 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
VPS25Q9BRG1 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VPS25Q9BRG1 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VPS25Q9BRG1 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VPS25Q9BRG1 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC12.72□□□□□ -0.37
VPS25Q9BRG1 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VPS25Q9BRG1 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VPS25Q9BRG1 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VPS25Q9BRG1 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
VPS25Q9BRG1 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
VPS25Q9BRG1 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC12.71□□□□□ -0.37
VPS25Q9BRG1 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VPS25Q9BRG1 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
VPS25Q9BRG1 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC12.71□□□□□ -0.37
VPS25Q9BRG1 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
VPS25Q9BRG1 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
VPS25Q9BRG1 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VPS25Q9BRG1 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VPS25Q9BRG1 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VPS25Q9BRG1 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC12.71□□□□□ -0.37
VPS25Q9BRG1 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC12.71□□□□□ -0.37
VPS25Q9BRG1 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC12.71□□□□□ -0.37
VPS25Q9BRG1 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VPS25Q9BRG1 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
VPS25Q9BRG1 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
VPS25Q9BRG1 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC12.71□□□□□ -0.37
VPS25Q9BRG1 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
VPS25Q9BRG1 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VPS25Q9BRG1 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VPS25Q9BRG1 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VPS25Q9BRG1 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
VPS25Q9BRG1 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VPS25Q9BRG1 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VPS25Q9BRG1 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
VPS25Q9BRG1 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC12.71□□□□□ -0.37
VPS25Q9BRG1 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VPS25Q9BRG1 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
VPS25Q9BRG1 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VPS25Q9BRG1 DUX4L9-201ENST00000449051 1259 ntBASIC12.71□□□□□ -0.37
VPS25Q9BRG1 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VPS25Q9BRG1 AC120024.1-201ENST00000562672 995 ntBASIC12.71□□□□□ -0.37
VPS25Q9BRG1 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VPS25Q9BRG1 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VPS25Q9BRG1 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
VPS25Q9BRG1 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC12.71□□□□□ -0.37
VPS25Q9BRG1 MOK-225ENST00000522867 1883 ntTSL 5 BASIC12.71□□□□□ -0.37
VPS25Q9BRG1 GOLGA8DP-202ENST00000341390 2184 ntBASIC12.71□□□□□ -0.37
VPS25Q9BRG1 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VPS25Q9BRG1 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
VPS25Q9BRG1 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
VPS25Q9BRG1 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
VPS25Q9BRG1 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
VPS25Q9BRG1 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
VPS25Q9BRG1 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
VPS25Q9BRG1 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
VPS25Q9BRG1 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
VPS25Q9BRG1 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
VPS25Q9BRG1 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
VPS25Q9BRG1 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC12.7□□□□□ -0.38
VPS25Q9BRG1 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VPS25Q9BRG1 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VPS25Q9BRG1 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC12.7□□□□□ -0.38
VPS25Q9BRG1 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
VPS25Q9BRG1 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VPS25Q9BRG1 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VPS25Q9BRG1 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VPS25Q9BRG1 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VPS25Q9BRG1 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
VPS25Q9BRG1 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VPS25Q9BRG1 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
VPS25Q9BRG1 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC12.7□□□□□ -0.38
VPS25Q9BRG1 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC12.7□□□□□ -0.38
VPS25Q9BRG1 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VPS25Q9BRG1 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VPS25Q9BRG1 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VPS25Q9BRG1 FAM45BP-202ENST00000592932 1624 ntBASIC12.7□□□□□ -0.38
VPS25Q9BRG1 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
VPS25Q9BRG1 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
VPS25Q9BRG1 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VPS25Q9BRG1 AC104640.1-201ENST00000562617 2109 ntBASIC12.7□□□□□ -0.38
VPS25Q9BRG1 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
VPS25Q9BRG1 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
VPS25Q9BRG1 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VPS25Q9BRG1 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC12.7□□□□□ -0.38
VPS25Q9BRG1 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC12.7□□□□□ -0.38
VPS25Q9BRG1 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC12.7□□□□□ -0.38
VPS25Q9BRG1 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VPS25Q9BRG1 AC026691.1-201ENST00000602502 2017 ntBASIC12.7□□□□□ -0.38
VPS25Q9BRG1 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
VPS25Q9BRG1 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
VPS25Q9BRG1 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VPS25Q9BRG1 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VPS25Q9BRG1 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
VPS25Q9BRG1 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
VPS25Q9BRG1 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VPS25Q9BRG1 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
VPS25Q9BRG1 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms