Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRGV9Q99603 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRGV9Q99603 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC14.22□□□□□ -0.13
TRGV9Q99603 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRGV9Q99603 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC14.22□□□□□ -0.13
TRGV9Q99603 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
TRGV9Q99603 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC14.22□□□□□ -0.13
TRGV9Q99603 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRGV9Q99603 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRGV9Q99603 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TRGV9Q99603 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC14.22□□□□□ -0.13
TRGV9Q99603 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC14.22□□□□□ -0.13
TRGV9Q99603 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC14.22□□□□□ -0.13
TRGV9Q99603 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC14.22□□□□□ -0.13
TRGV9Q99603 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC14.22□□□□□ -0.13
TRGV9Q99603 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRGV9Q99603 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRGV9Q99603 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TRGV9Q99603 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC14.22□□□□□ -0.13
TRGV9Q99603 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRGV9Q99603 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRGV9Q99603 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRGV9Q99603 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
TRGV9Q99603 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRGV9Q99603 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC14.22□□□□□ -0.13
TRGV9Q99603 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRGV9Q99603 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRGV9Q99603 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRGV9Q99603 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRGV9Q99603 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
TRGV9Q99603 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRGV9Q99603 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRGV9Q99603 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC14.22□□□□□ -0.13
TRGV9Q99603 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
TRGV9Q99603 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRGV9Q99603 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRGV9Q99603 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRGV9Q99603 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRGV9Q99603 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRGV9Q99603 ASL-204ENST00000395331 1538 ntTSL 5 BASIC14.21□□□□□ -0.13
TRGV9Q99603 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
TRGV9Q99603 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRGV9Q99603 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRGV9Q99603 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRGV9Q99603 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRGV9Q99603 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRGV9Q99603 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC14.21□□□□□ -0.13
TRGV9Q99603 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRGV9Q99603 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC14.21□□□□□ -0.13
TRGV9Q99603 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC14.21□□□□□ -0.13
TRGV9Q99603 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC14.21□□□□□ -0.13
TRGV9Q99603 FAM201B-201ENST00000458407 597 ntBASIC14.21□□□□□ -0.13
TRGV9Q99603 AP005242.2-201ENST00000580065 1175 ntBASIC14.21□□□□□ -0.13
TRGV9Q99603 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRGV9Q99603 ITM2C-210ENST00000620962 501 ntBASIC14.21□□□□□ -0.13
TRGV9Q99603 DECR2-212ENST00000627716 352 ntTSL 2 BASIC14.21□□□□□ -0.13
TRGV9Q99603 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRGV9Q99603 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC14.21□□□□□ -0.13
TRGV9Q99603 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC14.21□□□□□ -0.13
TRGV9Q99603 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRGV9Q99603 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC14.21□□□□□ -0.13
TRGV9Q99603 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
TRGV9Q99603 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
TRGV9Q99603 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRGV9Q99603 NME9-203ENST00000383180 2133 ntTSL 2 BASIC14.21□□□□□ -0.13
TRGV9Q99603 WAC-202ENST00000347934 2839 ntTSL 5 BASIC14.21□□□□□ -0.14
TRGV9Q99603 SP100-208ENST00000427101 1922 ntTSL 2 BASIC14.21□□□□□ -0.14
TRGV9Q99603 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
TRGV9Q99603 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRGV9Q99603 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRGV9Q99603 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRGV9Q99603 PODN-203ENST00000395871 2744 ntTSL 5 BASIC14.21□□□□□ -0.14
TRGV9Q99603 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRGV9Q99603 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRGV9Q99603 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.14
TRGV9Q99603 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
TRGV9Q99603 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC14.2□□□□□ -0.14
TRGV9Q99603 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TRGV9Q99603 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TRGV9Q99603 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRGV9Q99603 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRGV9Q99603 NARF-204ENST00000390006 1766 ntTSL 2 BASIC14.2□□□□□ -0.14
TRGV9Q99603 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRGV9Q99603 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
TRGV9Q99603 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TRGV9Q99603 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRGV9Q99603 ABHD17AP1-201ENST00000358206 933 ntBASIC14.2□□□□□ -0.14
TRGV9Q99603 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
TRGV9Q99603 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRGV9Q99603 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC14.2□□□□□ -0.14
TRGV9Q99603 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC14.2□□□□□ -0.14
TRGV9Q99603 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC14.2□□□□□ -0.14
TRGV9Q99603 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC14.2□□□□□ -0.14
TRGV9Q99603 WWOX-216ENST00000569818 525 ntBASIC14.2□□□□□ -0.14
TRGV9Q99603 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC14.2□□□□□ -0.14
TRGV9Q99603 MIR3180-4-201ENST00000582223 153 ntBASIC14.2□□□□□ -0.14
TRGV9Q99603 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC14.2□□□□□ -0.14
TRGV9Q99603 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRGV9Q99603 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TRGV9Q99603 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms