Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC14.54□□□□□ -0.08
RNF2Q99496 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RNF2Q99496 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RNF2Q99496 AC138028.4-201ENST00000564984 1845 ntBASIC14.54□□□□□ -0.08
RNF2Q99496 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RNF2Q99496 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
RNF2Q99496 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RNF2Q99496 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
RNF2Q99496 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RNF2Q99496 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RNF2Q99496 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC14.54□□□□□ -0.08
RNF2Q99496 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
RNF2Q99496 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
RNF2Q99496 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
RNF2Q99496 PKD1P5-201ENST00000532415 10291 ntBASIC14.54□□□□□ -0.08
RNF2Q99496 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RNF2Q99496 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RNF2Q99496 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RNF2Q99496 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RNF2Q99496 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.53□□□□□ -0.08
RNF2Q99496 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RNF2Q99496 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RNF2Q99496 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
RNF2Q99496 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC14.53□□□□□ -0.08
RNF2Q99496 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RNF2Q99496 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC14.53□□□□□ -0.08
RNF2Q99496 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC14.53□□□□□ -0.08
RNF2Q99496 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC14.53□□□□□ -0.08
RNF2Q99496 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC14.53□□□□□ -0.08
RNF2Q99496 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RNF2Q99496 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RNF2Q99496 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
RNF2Q99496 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RNF2Q99496 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RNF2Q99496 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
RNF2Q99496 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RNF2Q99496 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC14.53□□□□□ -0.08
RNF2Q99496 FAM197Y1-201ENST00000421178 764 ntBASIC14.53□□□□□ -0.08
RNF2Q99496 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
RNF2Q99496 PTPA-216ENST00000432651 857 ntTSL 2 BASIC14.53□□□□□ -0.08
RNF2Q99496 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RNF2Q99496 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC14.53□□□□□ -0.08
RNF2Q99496 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC14.53□□□□□ -0.08
RNF2Q99496 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC14.53□□□□□ -0.08
RNF2Q99496 AL031985.4-201ENST00000642138 673 ntBASIC14.53□□□□□ -0.08
RNF2Q99496 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC14.53□□□□□ -0.08
RNF2Q99496 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RNF2Q99496 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC14.53□□□□□ -0.08
RNF2Q99496 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RNF2Q99496 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC14.53□□□□□ -0.08
RNF2Q99496 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC14.52□□□□□ -0.08
RNF2Q99496 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
RNF2Q99496 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
RNF2Q99496 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RNF2Q99496 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RNF2Q99496 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RNF2Q99496 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RNF2Q99496 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RNF2Q99496 KRT8P41-201ENST00000533985 1514 ntBASIC14.52□□□□□ -0.08
RNF2Q99496 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
RNF2Q99496 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
RNF2Q99496 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
RNF2Q99496 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
RNF2Q99496 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
RNF2Q99496 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RNF2Q99496 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RNF2Q99496 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
RNF2Q99496 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
RNF2Q99496 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RNF2Q99496 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC14.52□□□□□ -0.09
RNF2Q99496 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
RNF2Q99496 AC012618.2-201ENST00000428058 849 ntBASIC14.52□□□□□ -0.09
RNF2Q99496 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC14.52□□□□□ -0.09
RNF2Q99496 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC14.52□□□□□ -0.09
RNF2Q99496 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
RNF2Q99496 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC14.52□□□□□ -0.09
RNF2Q99496 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
RNF2Q99496 CD177P1-201ENST00000606252 935 ntBASIC14.52□□□□□ -0.09
RNF2Q99496 AP001412.1-201ENST00000608405 714 ntBASIC14.52□□□□□ -0.09
RNF2Q99496 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC14.52□□□□□ -0.09
RNF2Q99496 ABBA01031674.1-201ENST00000635145 728 ntBASIC14.52□□□□□ -0.09
RNF2Q99496 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
RNF2Q99496 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
RNF2Q99496 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
RNF2Q99496 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
RNF2Q99496 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
RNF2Q99496 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RNF2Q99496 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RNF2Q99496 AC135776.1-201ENST00000319817 2481 ntBASIC14.52□□□□□ -0.09
RNF2Q99496 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.09
RNF2Q99496 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RNF2Q99496 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RNF2Q99496 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
RNF2Q99496 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RNF2Q99496 KRT8P32-201ENST00000512863 1461 ntBASIC14.51□□□□□ -0.09
RNF2Q99496 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RNF2Q99496 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RNF2Q99496 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RNF2Q99496 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RNF2Q99496 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms