Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 LINC00602-201ENST00000629776 2065 ntBASIC18.86■□□□□ 0.61
CDK5RAP1Q96SZ6 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDK5RAP1Q96SZ6 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.86■□□□□ 0.61
CDK5RAP1Q96SZ6 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.86■□□□□ 0.61
CDK5RAP1Q96SZ6 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDK5RAP1Q96SZ6 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDK5RAP1Q96SZ6 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDK5RAP1Q96SZ6 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDK5RAP1Q96SZ6 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDK5RAP1Q96SZ6 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDK5RAP1Q96SZ6 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDK5RAP1Q96SZ6 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.86■□□□□ 0.61
CDK5RAP1Q96SZ6 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDK5RAP1Q96SZ6 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDK5RAP1Q96SZ6 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDK5RAP1Q96SZ6 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDK5RAP1Q96SZ6 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.86■□□□□ 0.61
CDK5RAP1Q96SZ6 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDK5RAP1Q96SZ6 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDK5RAP1Q96SZ6 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDK5RAP1Q96SZ6 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDK5RAP1Q96SZ6 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CDK5RAP1Q96SZ6 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.86■□□□□ 0.61
CDK5RAP1Q96SZ6 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDK5RAP1Q96SZ6 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.86■□□□□ 0.61
CDK5RAP1Q96SZ6 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.86■□□□□ 0.61
CDK5RAP1Q96SZ6 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDK5RAP1Q96SZ6 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CDK5RAP1Q96SZ6 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDK5RAP1Q96SZ6 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
CDK5RAP1Q96SZ6 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDK5RAP1Q96SZ6 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDK5RAP1Q96SZ6 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDK5RAP1Q96SZ6 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDK5RAP1Q96SZ6 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CDK5RAP1Q96SZ6 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.85■□□□□ 0.61
CDK5RAP1Q96SZ6 WIZP1-201ENST00000531444 2299 ntBASIC18.85■□□□□ 0.61
CDK5RAP1Q96SZ6 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.85■□□□□ 0.61
CDK5RAP1Q96SZ6 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDK5RAP1Q96SZ6 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDK5RAP1Q96SZ6 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDK5RAP1Q96SZ6 LINC00167-201ENST00000530583 1419 ntBASIC18.85■□□□□ 0.61
CDK5RAP1Q96SZ6 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.85■□□□□ 0.61
CDK5RAP1Q96SZ6 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CDK5RAP1Q96SZ6 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDK5RAP1Q96SZ6 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDK5RAP1Q96SZ6 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CDK5RAP1Q96SZ6 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CDK5RAP1Q96SZ6 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.85■□□□□ 0.61
CDK5RAP1Q96SZ6 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.85■□□□□ 0.61
CDK5RAP1Q96SZ6 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDK5RAP1Q96SZ6 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.85■□□□□ 0.61
CDK5RAP1Q96SZ6 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.85■□□□□ 0.61
CDK5RAP1Q96SZ6 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDK5RAP1Q96SZ6 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.85■□□□□ 0.61
CDK5RAP1Q96SZ6 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CDK5RAP1Q96SZ6 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CDK5RAP1Q96SZ6 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDK5RAP1Q96SZ6 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDK5RAP1Q96SZ6 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDK5RAP1Q96SZ6 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.85■□□□□ 0.61
CDK5RAP1Q96SZ6 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.84■□□□□ 0.61
CDK5RAP1Q96SZ6 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDK5RAP1Q96SZ6 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.84■□□□□ 0.61
CDK5RAP1Q96SZ6 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDK5RAP1Q96SZ6 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDK5RAP1Q96SZ6 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDK5RAP1Q96SZ6 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDK5RAP1Q96SZ6 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDK5RAP1Q96SZ6 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CDK5RAP1Q96SZ6 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CDK5RAP1Q96SZ6 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDK5RAP1Q96SZ6 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDK5RAP1Q96SZ6 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.84■□□□□ 0.61
CDK5RAP1Q96SZ6 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.84■□□□□ 0.61
CDK5RAP1Q96SZ6 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDK5RAP1Q96SZ6 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDK5RAP1Q96SZ6 KRT17P6-201ENST00000453795 1220 ntBASIC18.84■□□□□ 0.61
CDK5RAP1Q96SZ6 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
CDK5RAP1Q96SZ6 AC068472.1-201ENST00000474589 881 ntBASIC18.84■□□□□ 0.61
CDK5RAP1Q96SZ6 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.84■□□□□ 0.61
CDK5RAP1Q96SZ6 KRT126P-201ENST00000549467 1181 ntBASIC18.84■□□□□ 0.61
CDK5RAP1Q96SZ6 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.84■□□□□ 0.61
CDK5RAP1Q96SZ6 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.84■□□□□ 0.61
CDK5RAP1Q96SZ6 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.84■□□□□ 0.61
CDK5RAP1Q96SZ6 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDK5RAP1Q96SZ6 AC087289.5-201ENST00000586076 3175 ntBASIC18.84■□□□□ 0.61
CDK5RAP1Q96SZ6 AC093503.3-201ENST00000624917 2352 ntBASIC18.84■□□□□ 0.61
CDK5RAP1Q96SZ6 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CDK5RAP1Q96SZ6 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.84■□□□□ 0.61
CDK5RAP1Q96SZ6 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CDK5RAP1Q96SZ6 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDK5RAP1Q96SZ6 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
CDK5RAP1Q96SZ6 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.84■□□□□ 0.61
CDK5RAP1Q96SZ6 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
CDK5RAP1Q96SZ6 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDK5RAP1Q96SZ6 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDK5RAP1Q96SZ6 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
CDK5RAP1Q96SZ6 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDK5RAP1Q96SZ6 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms