Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 REM2-202ENST00000536884 1331 ntTSL 2 BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 GNAS-203ENST00000306120 1878 ntBASIC5.51□□□□□ -1.53
HMCN1Q96RW7 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 MXI1-205ENST00000393134 889 ntTSL 2 BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 AC234644.1-201ENST00000406065 370 ntBASIC5.51□□□□□ -1.53
HMCN1Q96RW7 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 KRT18P32-201ENST00000424695 1287 ntBASIC5.51□□□□□ -1.53
HMCN1Q96RW7 DFFBP1-201ENST00000433250 979 ntBASIC5.51□□□□□ -1.53
HMCN1Q96RW7 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 POLD4-207ENST00000531239 584 ntTSL 2 BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 AC243960.2-201ENST00000600996 747 ntBASIC5.51□□□□□ -1.53
HMCN1Q96RW7 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 AP001059.3-201ENST00000619053 235 ntBASIC5.51□□□□□ -1.53
HMCN1Q96RW7 RAB34-224ENST00000636513 888 ntTSL 5 BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 AL109936.8-201ENST00000641772 604 ntBASIC5.51□□□□□ -1.53
HMCN1Q96RW7 AC007541.1-201ENST00000570282 1469 ntBASIC5.51□□□□□ -1.53
HMCN1Q96RW7 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 AC006333.2-201ENST00000607957 2099 ntBASIC5.51□□□□□ -1.53
HMCN1Q96RW7 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
HMCN1Q96RW7 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HMCN1Q96RW7 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HMCN1Q96RW7 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
HMCN1Q96RW7 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HMCN1Q96RW7 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HMCN1Q96RW7 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC5.5□□□□□ -1.53
HMCN1Q96RW7 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HMCN1Q96RW7 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
HMCN1Q96RW7 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC5.5□□□□□ -1.53
HMCN1Q96RW7 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC5.5□□□□□ -1.53
HMCN1Q96RW7 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HMCN1Q96RW7 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HMCN1Q96RW7 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC5.5□□□□□ -1.53
HMCN1Q96RW7 SDHAP1-207ENST00000440850 2000 ntBASIC5.5□□□□□ -1.53
HMCN1Q96RW7 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
HMCN1Q96RW7 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC5.5□□□□□ -1.53
HMCN1Q96RW7 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC5.5□□□□□ -1.53
HMCN1Q96RW7 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
HMCN1Q96RW7 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
HMCN1Q96RW7 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC5.5□□□□□ -1.53
HMCN1Q96RW7 SIGLEC16-201ENST00000599858 1437 ntBASIC5.5□□□□□ -1.53
HMCN1Q96RW7 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
HMCN1Q96RW7 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
HMCN1Q96RW7 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HMCN1Q96RW7 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HMCN1Q96RW7 ANKRD19P-201ENST00000338192 862 ntBASIC5.5□□□□□ -1.53
HMCN1Q96RW7 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
HMCN1Q96RW7 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HMCN1Q96RW7 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC5.5□□□□□ -1.53
HMCN1Q96RW7 PRYP5-201ENST00000451909 266 ntBASIC5.5□□□□□ -1.53
HMCN1Q96RW7 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HMCN1Q96RW7 AC007551.1-201ENST00000457394 519 ntBASIC5.5□□□□□ -1.53
HMCN1Q96RW7 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC5.5□□□□□ -1.53
HMCN1Q96RW7 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC5.5□□□□□ -1.53
HMCN1Q96RW7 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
HMCN1Q96RW7 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC5.5□□□□□ -1.53
HMCN1Q96RW7 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
HMCN1Q96RW7 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC5.5□□□□□ -1.53
HMCN1Q96RW7 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC5.5□□□□□ -1.53
HMCN1Q96RW7 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HMCN1Q96RW7 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
HMCN1Q96RW7 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HMCN1Q96RW7 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
HMCN1Q96RW7 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HMCN1Q96RW7 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC5.5□□□□□ -1.53
HMCN1Q96RW7 AC068137.2-201ENST00000605408 478 ntBASIC5.5□□□□□ -1.53
HMCN1Q96RW7 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HMCN1Q96RW7 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HMCN1Q96RW7 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC5.5□□□□□ -1.53
HMCN1Q96RW7 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC5.5□□□□□ -1.53
HMCN1Q96RW7 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HMCN1Q96RW7 RCC2P3-201ENST00000418112 1537 ntBASIC5.5□□□□□ -1.53
HMCN1Q96RW7 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
HMCN1Q96RW7 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
HMCN1Q96RW7 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
HMCN1Q96RW7 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC5.5□□□□□ -1.53
HMCN1Q96RW7 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
HMCN1Q96RW7 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
HMCN1Q96RW7 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HMCN1Q96RW7 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HMCN1Q96RW7 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC5.5□□□□□ -1.53
HMCN1Q96RW7 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC5.5□□□□□ -1.53
HMCN1Q96RW7 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC5.5□□□□□ -1.53
HMCN1Q96RW7 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC5.5□□□□□ -1.53
HMCN1Q96RW7 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC5.5□□□□□ -1.53
HMCN1Q96RW7 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC5.5□□□□□ -1.53
HMCN1Q96RW7 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms