Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC17Q96LX7 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC17Q96LX7 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC17Q96LX7 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC17Q96LX7 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC17Q96LX7 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.19■□□□□ 0.98
CCDC17Q96LX7 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC17Q96LX7 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC17Q96LX7 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC17Q96LX7 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC17Q96LX7 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC21.19■□□□□ 0.98
CCDC17Q96LX7 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC17Q96LX7 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC17Q96LX7 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CCDC17Q96LX7 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC21.18■□□□□ 0.98
CCDC17Q96LX7 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC17Q96LX7 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC17Q96LX7 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC17Q96LX7 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC17Q96LX7 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CCDC17Q96LX7 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
CCDC17Q96LX7 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CCDC17Q96LX7 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC17Q96LX7 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC21.18■□□□□ 0.98
CCDC17Q96LX7 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC21.18■□□□□ 0.98
CCDC17Q96LX7 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC17Q96LX7 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC21.18■□□□□ 0.98
CCDC17Q96LX7 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
CCDC17Q96LX7 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC17Q96LX7 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC21.18■□□□□ 0.98
CCDC17Q96LX7 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC17Q96LX7 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC21.18■□□□□ 0.98
CCDC17Q96LX7 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC17Q96LX7 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC21.18■□□□□ 0.98
CCDC17Q96LX7 AP000974.1-201ENST00000623909 2387 ntBASIC21.18■□□□□ 0.98
CCDC17Q96LX7 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC17Q96LX7 AC132938.6-201ENST00000623828 1655 ntBASIC21.18■□□□□ 0.98
CCDC17Q96LX7 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CCDC17Q96LX7 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC21.18■□□□□ 0.98
CCDC17Q96LX7 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC17Q96LX7 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC17Q96LX7 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC17Q96LX7 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC17Q96LX7 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC17Q96LX7 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CCDC17Q96LX7 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CCDC17Q96LX7 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC17Q96LX7 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC21.17■□□□□ 0.98
CCDC17Q96LX7 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC17Q96LX7 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC17Q96LX7 THAP5-204ENST00000438865 868 ntTSL 2 BASIC21.17■□□□□ 0.98
CCDC17Q96LX7 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC17Q96LX7 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC17Q96LX7 AC011467.2-201ENST00000598425 242 ntBASIC21.17■□□□□ 0.98
CCDC17Q96LX7 CALM3-211ENST00000598871 561 ntTSL 4 BASIC21.17■□□□□ 0.98
CCDC17Q96LX7 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
CCDC17Q96LX7 VPS51-217ENST00000639871 243 ntTSL 5 BASIC21.17■□□□□ 0.98
CCDC17Q96LX7 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC21.17■□□□□ 0.98
CCDC17Q96LX7 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC17Q96LX7 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC17Q96LX7 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
CCDC17Q96LX7 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC17Q96LX7 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
CCDC17Q96LX7 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC17Q96LX7 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC17Q96LX7 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC21.17■□□□□ 0.98
CCDC17Q96LX7 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC21.17■□□□□ 0.98
CCDC17Q96LX7 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.17■□□□□ 0.98
CCDC17Q96LX7 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC17Q96LX7 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC17Q96LX7 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC17Q96LX7 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC21.16■□□□□ 0.98
CCDC17Q96LX7 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
CCDC17Q96LX7 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC21.16■□□□□ 0.98
CCDC17Q96LX7 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC17Q96LX7 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC17Q96LX7 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC21.16■□□□□ 0.98
CCDC17Q96LX7 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC17Q96LX7 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC17Q96LX7 AC009078.2-202ENST00000463353 338 ntBASIC21.16■□□□□ 0.98
CCDC17Q96LX7 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC21.16■□□□□ 0.98
CCDC17Q96LX7 AF238378.1-201ENST00000526806 358 ntBASIC21.16■□□□□ 0.98
CCDC17Q96LX7 AP002469.2-201ENST00000531724 424 ntBASIC21.16■□□□□ 0.98
CCDC17Q96LX7 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC17Q96LX7 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC21.16■□□□□ 0.98
CCDC17Q96LX7 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC17Q96LX7 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC17Q96LX7 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC21.16■□□□□ 0.98
CCDC17Q96LX7 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC17Q96LX7 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC21.15■□□□□ 0.98
CCDC17Q96LX7 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC17Q96LX7 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
CCDC17Q96LX7 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC17Q96LX7 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC17Q96LX7 AC093010.1-201ENST00000473625 1624 ntBASIC21.15■□□□□ 0.98
CCDC17Q96LX7 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC17Q96LX7 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CCDC17Q96LX7 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC17Q96LX7 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CCDC17Q96LX7 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms