Protein–RNA interactions for Protein: Q96JS3

PGBD1, PiggyBac transposable element-derived protein 1, humanhuman

Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1Q96JS3 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC21.18■□□□□ 0.98
PGBD1Q96JS3 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
PGBD1Q96JS3 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PGBD1Q96JS3 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC21.18■□□□□ 0.98
PGBD1Q96JS3 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC21.18■□□□□ 0.98
PGBD1Q96JS3 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC21.18■□□□□ 0.98
PGBD1Q96JS3 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC21.18■□□□□ 0.98
PGBD1Q96JS3 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC21.18■□□□□ 0.98
PGBD1Q96JS3 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
PGBD1Q96JS3 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PGBD1Q96JS3 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PGBD1Q96JS3 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PGBD1Q96JS3 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
PGBD1Q96JS3 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC21.18■□□□□ 0.98
PGBD1Q96JS3 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC21.18■□□□□ 0.98
PGBD1Q96JS3 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PGBD1Q96JS3 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC21.18■□□□□ 0.98
PGBD1Q96JS3 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PGBD1Q96JS3 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PGBD1Q96JS3 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PGBD1Q96JS3 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC21.17■□□□□ 0.98
PGBD1Q96JS3 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PGBD1Q96JS3 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PGBD1Q96JS3 HOMER2P1-201ENST00000455653 964 ntBASIC21.17■□□□□ 0.98
PGBD1Q96JS3 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC21.17■□□□□ 0.98
PGBD1Q96JS3 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PGBD1Q96JS3 AC104390.1-201ENST00000555663 520 ntBASIC21.17■□□□□ 0.98
PGBD1Q96JS3 AC010240.3-201ENST00000607688 395 ntBASIC21.17■□□□□ 0.98
PGBD1Q96JS3 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC21.17■□□□□ 0.98
PGBD1Q96JS3 MED25-212ENST00000618715 1467 ntTSL 5 BASIC21.17■□□□□ 0.98
PGBD1Q96JS3 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PGBD1Q96JS3 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC21.17■□□□□ 0.98
PGBD1Q96JS3 REXO1L9P-201ENST00000604264 2108 ntBASIC21.17■□□□□ 0.98
PGBD1Q96JS3 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC21.17■□□□□ 0.98
PGBD1Q96JS3 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
PGBD1Q96JS3 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC21.17■□□□□ 0.98
PGBD1Q96JS3 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
PGBD1Q96JS3 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
PGBD1Q96JS3 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
PGBD1Q96JS3 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PGBD1Q96JS3 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PGBD1Q96JS3 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PGBD1Q96JS3 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
PGBD1Q96JS3 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PGBD1Q96JS3 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC21.16■□□□□ 0.98
PGBD1Q96JS3 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PGBD1Q96JS3 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PGBD1Q96JS3 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.16■□□□□ 0.98
PGBD1Q96JS3 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PGBD1Q96JS3 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC21.16■□□□□ 0.98
PGBD1Q96JS3 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC21.16■□□□□ 0.98
PGBD1Q96JS3 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
PGBD1Q96JS3 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PGBD1Q96JS3 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC21.16■□□□□ 0.98
PGBD1Q96JS3 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PGBD1Q96JS3 CYP51A1P1-201ENST00000492267 1507 ntBASIC21.16■□□□□ 0.98
PGBD1Q96JS3 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PGBD1Q96JS3 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC21.16■□□□□ 0.98
PGBD1Q96JS3 STARP1-201ENST00000397973 869 ntBASIC21.16■□□□□ 0.98
PGBD1Q96JS3 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PGBD1Q96JS3 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PGBD1Q96JS3 AL031133.1-201ENST00000406807 723 ntBASIC21.16■□□□□ 0.98
PGBD1Q96JS3 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PGBD1Q96JS3 USF2-205ENST00000594064 1179 ntTSL 2 BASIC21.16■□□□□ 0.98
PGBD1Q96JS3 HYMAI.1-201ENST00000620949 238 ntBASIC21.16■□□□□ 0.98
PGBD1Q96JS3 AC079602.3-201ENST00000623931 403 ntBASIC21.16■□□□□ 0.98
PGBD1Q96JS3 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PGBD1Q96JS3 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PGBD1Q96JS3 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PGBD1Q96JS3 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
PGBD1Q96JS3 AC138028.4-201ENST00000564984 1845 ntBASIC21.15■□□□□ 0.98
PGBD1Q96JS3 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PGBD1Q96JS3 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
PGBD1Q96JS3 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC21.15■□□□□ 0.98
PGBD1Q96JS3 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PGBD1Q96JS3 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PGBD1Q96JS3 AC134043.2-201ENST00000624206 2238 ntBASIC21.15■□□□□ 0.98
PGBD1Q96JS3 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PGBD1Q96JS3 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC21.15■□□□□ 0.98
PGBD1Q96JS3 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PGBD1Q96JS3 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PGBD1Q96JS3 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC21.15■□□□□ 0.98
PGBD1Q96JS3 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC21.15■□□□□ 0.98
PGBD1Q96JS3 MIR3917-201ENST00000580971 93 ntBASIC21.15■□□□□ 0.98
PGBD1Q96JS3 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC21.15■□□□□ 0.98
PGBD1Q96JS3 AC083849.1-201ENST00000615227 514 ntBASIC21.15■□□□□ 0.98
PGBD1Q96JS3 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC21.15■□□□□ 0.98
PGBD1Q96JS3 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21.15■□□□□ 0.98
PGBD1Q96JS3 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
PGBD1Q96JS3 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
PGBD1Q96JS3 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PGBD1Q96JS3 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PGBD1Q96JS3 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PGBD1Q96JS3 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC21.15■□□□□ 0.98
PGBD1Q96JS3 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
PGBD1Q96JS3 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PGBD1Q96JS3 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
PGBD1Q96JS3 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC21.14■□□□□ 0.98
PGBD1Q96JS3 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PGBD1Q96JS3 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms