Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.37■□□□□ 0.37
ITCHQ96J02 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ITCHQ96J02 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.37■□□□□ 0.37
ITCHQ96J02 SDHAP2-201ENST00000455183 2001 ntBASIC17.37■□□□□ 0.37
ITCHQ96J02 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.37■□□□□ 0.37
ITCHQ96J02 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ITCHQ96J02 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ITCHQ96J02 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.37■□□□□ 0.37
ITCHQ96J02 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ITCHQ96J02 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ITCHQ96J02 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ITCHQ96J02 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ITCHQ96J02 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
ITCHQ96J02 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.37■□□□□ 0.37
ITCHQ96J02 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.37■□□□□ 0.37
ITCHQ96J02 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ITCHQ96J02 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.37■□□□□ 0.37
ITCHQ96J02 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
ITCHQ96J02 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.37■□□□□ 0.37
ITCHQ96J02 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ITCHQ96J02 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.37■□□□□ 0.37
ITCHQ96J02 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ITCHQ96J02 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
ITCHQ96J02 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.37■□□□□ 0.37
ITCHQ96J02 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ITCHQ96J02 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ITCHQ96J02 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
ITCHQ96J02 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
ITCHQ96J02 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.37■□□□□ 0.37
ITCHQ96J02 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ITCHQ96J02 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
ITCHQ96J02 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ITCHQ96J02 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.37■□□□□ 0.37
ITCHQ96J02 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
ITCHQ96J02 AC036111.1-201ENST00000533973 1582 ntBASIC17.36■□□□□ 0.37
ITCHQ96J02 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.36■□□□□ 0.37
ITCHQ96J02 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ITCHQ96J02 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
ITCHQ96J02 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ITCHQ96J02 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.36■□□□□ 0.37
ITCHQ96J02 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
ITCHQ96J02 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.36■□□□□ 0.37
ITCHQ96J02 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.36■□□□□ 0.37
ITCHQ96J02 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ITCHQ96J02 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.36■□□□□ 0.37
ITCHQ96J02 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ITCHQ96J02 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ITCHQ96J02 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ITCHQ96J02 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
ITCHQ96J02 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ITCHQ96J02 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
ITCHQ96J02 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.36■□□□□ 0.37
ITCHQ96J02 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.36■□□□□ 0.37
ITCHQ96J02 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.36■□□□□ 0.37
ITCHQ96J02 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ITCHQ96J02 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ITCHQ96J02 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
ITCHQ96J02 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ITCHQ96J02 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ITCHQ96J02 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ITCHQ96J02 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
ITCHQ96J02 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.36■□□□□ 0.37
ITCHQ96J02 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ITCHQ96J02 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
ITCHQ96J02 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.36■□□□□ 0.37
ITCHQ96J02 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ITCHQ96J02 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ITCHQ96J02 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
ITCHQ96J02 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ITCHQ96J02 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ITCHQ96J02 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ITCHQ96J02 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.35■□□□□ 0.37
ITCHQ96J02 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.35■□□□□ 0.37
ITCHQ96J02 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
ITCHQ96J02 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
ITCHQ96J02 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
ITCHQ96J02 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ITCHQ96J02 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.35■□□□□ 0.37
ITCHQ96J02 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.35■□□□□ 0.37
ITCHQ96J02 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ITCHQ96J02 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.35■□□□□ 0.37
ITCHQ96J02 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ITCHQ96J02 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ITCHQ96J02 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.35■□□□□ 0.37
ITCHQ96J02 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
ITCHQ96J02 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ITCHQ96J02 FAM201B-201ENST00000458407 597 ntBASIC17.35■□□□□ 0.37
ITCHQ96J02 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.35■□□□□ 0.37
ITCHQ96J02 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
ITCHQ96J02 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.35■□□□□ 0.37
ITCHQ96J02 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.35■□□□□ 0.37
ITCHQ96J02 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
ITCHQ96J02 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ITCHQ96J02 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ITCHQ96J02 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.35■□□□□ 0.37
ITCHQ96J02 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ITCHQ96J02 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ITCHQ96J02 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ITCHQ96J02 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
ITCHQ96J02 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms