Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CHMP6Q96FZ7 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP6Q96FZ7 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.36■□□□□ 0.53
CHMP6Q96FZ7 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP6Q96FZ7 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP6Q96FZ7 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.36■□□□□ 0.53
CHMP6Q96FZ7 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CHMP6Q96FZ7 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CHMP6Q96FZ7 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.36■□□□□ 0.53
CHMP6Q96FZ7 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.36■□□□□ 0.53
CHMP6Q96FZ7 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.36■□□□□ 0.53
CHMP6Q96FZ7 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CHMP6Q96FZ7 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP6Q96FZ7 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CHMP6Q96FZ7 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.36■□□□□ 0.53
CHMP6Q96FZ7 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.36■□□□□ 0.53
CHMP6Q96FZ7 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.36■□□□□ 0.53
CHMP6Q96FZ7 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP6Q96FZ7 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.36■□□□□ 0.53
CHMP6Q96FZ7 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.36■□□□□ 0.53
CHMP6Q96FZ7 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP6Q96FZ7 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
CHMP6Q96FZ7 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CHMP6Q96FZ7 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.36■□□□□ 0.53
CHMP6Q96FZ7 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP6Q96FZ7 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.36■□□□□ 0.53
CHMP6Q96FZ7 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CHMP6Q96FZ7 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP6Q96FZ7 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP6Q96FZ7 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP6Q96FZ7 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP6Q96FZ7 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP6Q96FZ7 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.35■□□□□ 0.53
CHMP6Q96FZ7 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.35■□□□□ 0.53
CHMP6Q96FZ7 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP6Q96FZ7 AC008894.3-201ENST00000624324 3103 ntBASIC18.35■□□□□ 0.53
CHMP6Q96FZ7 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP6Q96FZ7 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP6Q96FZ7 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.35■□□□□ 0.53
CHMP6Q96FZ7 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP6Q96FZ7 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP6Q96FZ7 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP6Q96FZ7 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP6Q96FZ7 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
CHMP6Q96FZ7 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP6Q96FZ7 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP6Q96FZ7 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP6Q96FZ7 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.35■□□□□ 0.53
CHMP6Q96FZ7 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.35■□□□□ 0.53
CHMP6Q96FZ7 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP6Q96FZ7 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CHMP6Q96FZ7 AC069152.1-201ENST00000438030 544 ntBASIC18.35■□□□□ 0.53
CHMP6Q96FZ7 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.35■□□□□ 0.53
CHMP6Q96FZ7 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP6Q96FZ7 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.35■□□□□ 0.53
CHMP6Q96FZ7 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP6Q96FZ7 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP6Q96FZ7 HLA-B-256ENST00000639848 1089 ntBASIC18.35■□□□□ 0.53
CHMP6Q96FZ7 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CHMP6Q96FZ7 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP6Q96FZ7 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP6Q96FZ7 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP6Q96FZ7 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP6Q96FZ7 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP6Q96FZ7 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CHMP6Q96FZ7 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CHMP6Q96FZ7 UBALD1-205ENST00000590891 2641 ntBASIC18.35■□□□□ 0.53
CHMP6Q96FZ7 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP6Q96FZ7 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.35■□□□□ 0.53
CHMP6Q96FZ7 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP6Q96FZ7 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP6Q96FZ7 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP6Q96FZ7 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP6Q96FZ7 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP6Q96FZ7 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP6Q96FZ7 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP6Q96FZ7 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP6Q96FZ7 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
CHMP6Q96FZ7 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP6Q96FZ7 CROCCP1-201ENST00000426910 5675 ntBASIC18.34■□□□□ 0.53
CHMP6Q96FZ7 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP6Q96FZ7 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CHMP6Q96FZ7 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CHMP6Q96FZ7 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP6Q96FZ7 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP6Q96FZ7 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.34■□□□□ 0.53
CHMP6Q96FZ7 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CHMP6Q96FZ7 HLA-L-209ENST00000420110 1011 ntBASIC18.34■□□□□ 0.53
CHMP6Q96FZ7 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.34■□□□□ 0.53
CHMP6Q96FZ7 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.34■□□□□ 0.53
CHMP6Q96FZ7 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.34■□□□□ 0.53
CHMP6Q96FZ7 PNMA6B-201ENST00000538162 1200 ntBASIC18.34■□□□□ 0.53
CHMP6Q96FZ7 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP6Q96FZ7 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP6Q96FZ7 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.34■□□□□ 0.53
CHMP6Q96FZ7 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP6Q96FZ7 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP6Q96FZ7 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP6Q96FZ7 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP6Q96FZ7 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms