Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
DDX11Q96FC9 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
DDX11Q96FC9 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
DDX11Q96FC9 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
DDX11Q96FC9 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
DDX11Q96FC9 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
DDX11Q96FC9 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
DDX11Q96FC9 IPPK-202ENST00000375522 882 ntTSL 3 BASIC21.64■■□□□ 1.05
DDX11Q96FC9 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
DDX11Q96FC9 HCG4P8-203ENST00000443049 980 ntBASIC21.64■■□□□ 1.05
DDX11Q96FC9 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC21.64■■□□□ 1.05
DDX11Q96FC9 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC21.64■■□□□ 1.05
DDX11Q96FC9 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC21.64■■□□□ 1.05
DDX11Q96FC9 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC21.64■■□□□ 1.05
DDX11Q96FC9 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
DDX11Q96FC9 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
DDX11Q96FC9 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
DDX11Q96FC9 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.05
DDX11Q96FC9 MYLKP1-201ENST00000509077 1580 ntBASIC21.64■■□□□ 1.05
DDX11Q96FC9 AC036111.1-201ENST00000533973 1582 ntBASIC21.64■■□□□ 1.05
DDX11Q96FC9 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
DDX11Q96FC9 AC135776.1-201ENST00000319817 2481 ntBASIC21.64■■□□□ 1.05
DDX11Q96FC9 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC21.64■■□□□ 1.05
DDX11Q96FC9 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
DDX11Q96FC9 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
DDX11Q96FC9 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
DDX11Q96FC9 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC21.63■■□□□ 1.05
DDX11Q96FC9 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
DDX11Q96FC9 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
DDX11Q96FC9 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
DDX11Q96FC9 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC21.63■■□□□ 1.05
DDX11Q96FC9 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
DDX11Q96FC9 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
DDX11Q96FC9 ELP6-205ENST00000439305 880 ntTSL 2 BASIC21.63■■□□□ 1.05
DDX11Q96FC9 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC21.63■■□□□ 1.05
DDX11Q96FC9 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
DDX11Q96FC9 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC21.63■■□□□ 1.05
DDX11Q96FC9 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
DDX11Q96FC9 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
DDX11Q96FC9 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
DDX11Q96FC9 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
DDX11Q96FC9 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
DDX11Q96FC9 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
DDX11Q96FC9 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC21.63■■□□□ 1.05
DDX11Q96FC9 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
DDX11Q96FC9 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
DDX11Q96FC9 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
DDX11Q96FC9 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC21.62■■□□□ 1.05
DDX11Q96FC9 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
DDX11Q96FC9 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
DDX11Q96FC9 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
DDX11Q96FC9 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
DDX11Q96FC9 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
DDX11Q96FC9 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
DDX11Q96FC9 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
DDX11Q96FC9 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
DDX11Q96FC9 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC21.62■■□□□ 1.05
DDX11Q96FC9 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC21.62■■□□□ 1.05
DDX11Q96FC9 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
DDX11Q96FC9 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
DDX11Q96FC9 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC21.62■■□□□ 1.05
DDX11Q96FC9 AC034232.1-201ENST00000506026 1064 ntBASIC21.62■■□□□ 1.05
DDX11Q96FC9 CLN6-214ENST00000636314 442 ntTSL 3 BASIC21.62■■□□□ 1.05
DDX11Q96FC9 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
DDX11Q96FC9 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
DDX11Q96FC9 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
DDX11Q96FC9 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DDX11Q96FC9 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DDX11Q96FC9 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
DDX11Q96FC9 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC21.61■■□□□ 1.05
DDX11Q96FC9 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
DDX11Q96FC9 ABALON-201ENST00000629058 1903 ntBASIC21.61■■□□□ 1.05
DDX11Q96FC9 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC21.61■■□□□ 1.05
DDX11Q96FC9 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DDX11Q96FC9 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
DDX11Q96FC9 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DDX11Q96FC9 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DDX11Q96FC9 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DDX11Q96FC9 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DDX11Q96FC9 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC21.61■■□□□ 1.05
DDX11Q96FC9 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
DDX11Q96FC9 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
DDX11Q96FC9 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC21.61■■□□□ 1.05
DDX11Q96FC9 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC21.61■■□□□ 1.05
DDX11Q96FC9 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DDX11Q96FC9 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
DDX11Q96FC9 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DDX11Q96FC9 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC21.61■■□□□ 1.05
DDX11Q96FC9 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC21.61■■□□□ 1.05
DDX11Q96FC9 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DDX11Q96FC9 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
DDX11Q96FC9 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
DDX11Q96FC9 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
DDX11Q96FC9 AR-207ENST00000612010 3896 ntTSL 5 BASIC21.6■■□□□ 1.05
DDX11Q96FC9 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
DDX11Q96FC9 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
DDX11Q96FC9 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
DDX11Q96FC9 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
DDX11Q96FC9 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
DDX11Q96FC9 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms