Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC97Q96F63 AC092647.4-201ENST00000457211 535 ntBASIC18.58■□□□□ 0.56
CCDC97Q96F63 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC97Q96F63 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC97Q96F63 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.58■□□□□ 0.56
CCDC97Q96F63 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC97Q96F63 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC97Q96F63 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC97Q96F63 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC97Q96F63 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC97Q96F63 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC97Q96F63 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.57■□□□□ 0.56
CCDC97Q96F63 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.57■□□□□ 0.56
CCDC97Q96F63 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CCDC97Q96F63 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC97Q96F63 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CCDC97Q96F63 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC97Q96F63 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC97Q96F63 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC97Q96F63 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.57■□□□□ 0.56
CCDC97Q96F63 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC97Q96F63 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CCDC97Q96F63 AC036111.1-201ENST00000533973 1582 ntBASIC18.57■□□□□ 0.56
CCDC97Q96F63 AC093525.10-201ENST00000625130 1569 ntBASIC18.57■□□□□ 0.56
CCDC97Q96F63 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.57■□□□□ 0.56
CCDC97Q96F63 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.57■□□□□ 0.56
CCDC97Q96F63 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.57■□□□□ 0.56
CCDC97Q96F63 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.57■□□□□ 0.56
CCDC97Q96F63 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC97Q96F63 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC97Q96F63 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC97Q96F63 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.57■□□□□ 0.56
CCDC97Q96F63 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.57■□□□□ 0.56
CCDC97Q96F63 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.57■□□□□ 0.56
CCDC97Q96F63 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
CCDC97Q96F63 AL512604.3-201ENST00000569583 964 ntBASIC18.57■□□□□ 0.56
CCDC97Q96F63 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC97Q96F63 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CCDC97Q96F63 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC97Q96F63 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC97Q96F63 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC97Q96F63 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC97Q96F63 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC97Q96F63 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
CCDC97Q96F63 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
CCDC97Q96F63 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CCDC97Q96F63 KRT8P45-201ENST00000414328 1447 ntBASIC18.57■□□□□ 0.56
CCDC97Q96F63 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC97Q96F63 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC97Q96F63 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC97Q96F63 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC97Q96F63 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC97Q96F63 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC97Q96F63 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.56■□□□□ 0.56
CCDC97Q96F63 AL357033.4-201ENST00000617703 1807 ntBASIC18.56■□□□□ 0.56
CCDC97Q96F63 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC97Q96F63 AC099343.3-201ENST00000605834 2503 ntBASIC18.56■□□□□ 0.56
CCDC97Q96F63 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC97Q96F63 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.56■□□□□ 0.56
CCDC97Q96F63 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC97Q96F63 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC97Q96F63 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC97Q96F63 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.56■□□□□ 0.56
CCDC97Q96F63 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC97Q96F63 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC97Q96F63 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC97Q96F63 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.56■□□□□ 0.56
CCDC97Q96F63 ANO7L1-203ENST00000602586 1720 ntBASIC18.56■□□□□ 0.56
CCDC97Q96F63 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.56■□□□□ 0.56
CCDC97Q96F63 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC97Q96F63 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC97Q96F63 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC97Q96F63 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC97Q96F63 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC97Q96F63 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC97Q96F63 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC97Q96F63 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC97Q96F63 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC97Q96F63 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC97Q96F63 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC97Q96F63 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC97Q96F63 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC97Q96F63 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC97Q96F63 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC97Q96F63 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC97Q96F63 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC97Q96F63 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC97Q96F63 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CCDC97Q96F63 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC97Q96F63 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC97Q96F63 AC020916.1-201ENST00000587762 1774 ntBASIC18.55■□□□□ 0.56
CCDC97Q96F63 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC97Q96F63 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC97Q96F63 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC97Q96F63 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC97Q96F63 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.55■□□□□ 0.56
CCDC97Q96F63 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC97Q96F63 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.55■□□□□ 0.56
CCDC97Q96F63 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC97Q96F63 AC005082.1-201ENST00000413042 2259 ntBASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms