Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.35■□□□□ 0.37
LRRC58Q96CX6 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
LRRC58Q96CX6 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC58Q96CX6 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC58Q96CX6 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC58Q96CX6 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
LRRC58Q96CX6 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
LRRC58Q96CX6 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC58Q96CX6 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC58Q96CX6 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC58Q96CX6 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC58Q96CX6 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
LRRC58Q96CX6 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC58Q96CX6 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC58Q96CX6 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC58Q96CX6 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC58Q96CX6 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC58Q96CX6 B3GAT3P1-201ENST00000471720 806 ntBASIC17.34■□□□□ 0.37
LRRC58Q96CX6 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC58Q96CX6 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC58Q96CX6 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC58Q96CX6 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
LRRC58Q96CX6 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC58Q96CX6 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC58Q96CX6 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC58Q96CX6 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
LRRC58Q96CX6 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC58Q96CX6 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.37
LRRC58Q96CX6 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRRC58Q96CX6 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRRC58Q96CX6 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRRC58Q96CX6 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.33■□□□□ 0.37
LRRC58Q96CX6 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.33■□□□□ 0.37
LRRC58Q96CX6 AC106820.2-201ENST00000563775 3264 ntBASIC17.33■□□□□ 0.37
LRRC58Q96CX6 AL023806.1-201ENST00000603994 1649 ntBASIC17.33■□□□□ 0.37
LRRC58Q96CX6 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRRC58Q96CX6 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRRC58Q96CX6 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
LRRC58Q96CX6 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRRC58Q96CX6 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRRC58Q96CX6 ABHD17AP1-201ENST00000358206 933 ntBASIC17.33■□□□□ 0.36
LRRC58Q96CX6 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.33■□□□□ 0.36
LRRC58Q96CX6 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRRC58Q96CX6 MIR149-201ENST00000384879 89 ntBASIC17.33■□□□□ 0.36
LRRC58Q96CX6 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LRRC58Q96CX6 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRRC58Q96CX6 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.33■□□□□ 0.36
LRRC58Q96CX6 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.33■□□□□ 0.36
LRRC58Q96CX6 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.33■□□□□ 0.36
LRRC58Q96CX6 MIR6786-201ENST00000616843 113 ntBASIC17.33■□□□□ 0.36
LRRC58Q96CX6 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRRC58Q96CX6 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRRC58Q96CX6 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
LRRC58Q96CX6 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.33■□□□□ 0.36
LRRC58Q96CX6 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRRC58Q96CX6 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.33■□□□□ 0.36
LRRC58Q96CX6 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
LRRC58Q96CX6 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRRC58Q96CX6 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LRRC58Q96CX6 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRRC58Q96CX6 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRRC58Q96CX6 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRRC58Q96CX6 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRRC58Q96CX6 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRRC58Q96CX6 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
LRRC58Q96CX6 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC58Q96CX6 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC58Q96CX6 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC58Q96CX6 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC58Q96CX6 AD000864.1-201ENST00000624076 2295 ntBASIC17.32■□□□□ 0.36
LRRC58Q96CX6 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC58Q96CX6 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC58Q96CX6 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
LRRC58Q96CX6 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC58Q96CX6 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC58Q96CX6 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.32■□□□□ 0.36
LRRC58Q96CX6 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC58Q96CX6 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC58Q96CX6 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
LRRC58Q96CX6 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC58Q96CX6 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.32■□□□□ 0.36
LRRC58Q96CX6 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC58Q96CX6 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC58Q96CX6 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.32■□□□□ 0.36
LRRC58Q96CX6 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
LRRC58Q96CX6 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.32■□□□□ 0.36
LRRC58Q96CX6 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.32■□□□□ 0.36
LRRC58Q96CX6 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
LRRC58Q96CX6 AP000692.2-201ENST00000608391 879 ntBASIC17.32■□□□□ 0.36
LRRC58Q96CX6 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.32■□□□□ 0.36
LRRC58Q96CX6 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC58Q96CX6 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
LRRC58Q96CX6 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.32■□□□□ 0.36
LRRC58Q96CX6 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC58Q96CX6 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
LRRC58Q96CX6 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.32■□□□□ 0.36
LRRC58Q96CX6 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC58Q96CX6 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC58Q96CX6 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC58Q96CX6 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms