Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
CPNE4Q96A23 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CPNE4Q96A23 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CPNE4Q96A23 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.35■□□□□ 0.21
CPNE4Q96A23 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.35■□□□□ 0.21
CPNE4Q96A23 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.34■□□□□ 0.21
CPNE4Q96A23 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CPNE4Q96A23 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CPNE4Q96A23 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CPNE4Q96A23 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CPNE4Q96A23 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CPNE4Q96A23 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CPNE4Q96A23 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CPNE4Q96A23 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CPNE4Q96A23 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CPNE4Q96A23 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CPNE4Q96A23 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.34■□□□□ 0.21
CPNE4Q96A23 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.34■□□□□ 0.21
CPNE4Q96A23 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.34■□□□□ 0.21
CPNE4Q96A23 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CPNE4Q96A23 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.34■□□□□ 0.21
CPNE4Q96A23 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.34■□□□□ 0.21
CPNE4Q96A23 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.34■□□□□ 0.21
CPNE4Q96A23 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.34■□□□□ 0.21
CPNE4Q96A23 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.34■□□□□ 0.21
CPNE4Q96A23 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.34■□□□□ 0.21
CPNE4Q96A23 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CPNE4Q96A23 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CPNE4Q96A23 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.34■□□□□ 0.21
CPNE4Q96A23 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CPNE4Q96A23 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CPNE4Q96A23 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.34■□□□□ 0.21
CPNE4Q96A23 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CPNE4Q96A23 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CPNE4Q96A23 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CPNE4Q96A23 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.33■□□□□ 0.21
CPNE4Q96A23 AL024508.2-201ENST00000607749 1894 ntBASIC16.33■□□□□ 0.21
CPNE4Q96A23 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CPNE4Q96A23 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CPNE4Q96A23 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CPNE4Q96A23 LTB4R2-202ENST00000528054 3092 ntBASIC16.33■□□□□ 0.21
CPNE4Q96A23 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CPNE4Q96A23 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CPNE4Q96A23 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CPNE4Q96A23 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CPNE4Q96A23 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CPNE4Q96A23 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CPNE4Q96A23 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CPNE4Q96A23 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CPNE4Q96A23 AC099343.3-201ENST00000605834 2503 ntBASIC16.33■□□□□ 0.2
CPNE4Q96A23 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.33■□□□□ 0.2
CPNE4Q96A23 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CPNE4Q96A23 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CPNE4Q96A23 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.33■□□□□ 0.2
CPNE4Q96A23 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CPNE4Q96A23 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.33■□□□□ 0.2
CPNE4Q96A23 AC113404.2-201ENST00000507884 177 ntBASIC16.33■□□□□ 0.2
CPNE4Q96A23 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.33■□□□□ 0.2
CPNE4Q96A23 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.33■□□□□ 0.2
CPNE4Q96A23 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.33■□□□□ 0.2
CPNE4Q96A23 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.33■□□□□ 0.2
CPNE4Q96A23 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CPNE4Q96A23 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CPNE4Q96A23 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CPNE4Q96A23 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.33■□□□□ 0.2
CPNE4Q96A23 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CPNE4Q96A23 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CPNE4Q96A23 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.33■□□□□ 0.2
CPNE4Q96A23 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CPNE4Q96A23 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CPNE4Q96A23 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.33■□□□□ 0.2
CPNE4Q96A23 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
CPNE4Q96A23 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.33■□□□□ 0.2
CPNE4Q96A23 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CPNE4Q96A23 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.33■□□□□ 0.2
CPNE4Q96A23 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.33■□□□□ 0.2
CPNE4Q96A23 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CPNE4Q96A23 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CPNE4Q96A23 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.33■□□□□ 0.2
CPNE4Q96A23 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.33■□□□□ 0.2
CPNE4Q96A23 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE4Q96A23 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE4Q96A23 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.32■□□□□ 0.2
CPNE4Q96A23 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.32■□□□□ 0.2
CPNE4Q96A23 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE4Q96A23 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CPNE4Q96A23 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE4Q96A23 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE4Q96A23 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE4Q96A23 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE4Q96A23 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE4Q96A23 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.32■□□□□ 0.2
CPNE4Q96A23 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.32■□□□□ 0.2
CPNE4Q96A23 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.32■□□□□ 0.2
CPNE4Q96A23 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE4Q96A23 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE4Q96A23 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.32■□□□□ 0.2
CPNE4Q96A23 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE4Q96A23 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE4Q96A23 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms