Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCG3Q8WXD2 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.68■□□□□ 0.58
SCG3Q8WXD2 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.68■□□□□ 0.58
SCG3Q8WXD2 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.68■□□□□ 0.58
SCG3Q8WXD2 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCG3Q8WXD2 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCG3Q8WXD2 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCG3Q8WXD2 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCG3Q8WXD2 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.68■□□□□ 0.58
SCG3Q8WXD2 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SCG3Q8WXD2 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.68■□□□□ 0.58
SCG3Q8WXD2 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.68■□□□□ 0.58
SCG3Q8WXD2 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.68■□□□□ 0.58
SCG3Q8WXD2 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.68■□□□□ 0.58
SCG3Q8WXD2 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SCG3Q8WXD2 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.68■□□□□ 0.58
SCG3Q8WXD2 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
SCG3Q8WXD2 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.68■□□□□ 0.58
SCG3Q8WXD2 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCG3Q8WXD2 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCG3Q8WXD2 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SCG3Q8WXD2 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCG3Q8WXD2 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.68■□□□□ 0.58
SCG3Q8WXD2 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.68■□□□□ 0.58
SCG3Q8WXD2 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SCG3Q8WXD2 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SCG3Q8WXD2 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCG3Q8WXD2 KRT8P45-201ENST00000414328 1447 ntBASIC18.67■□□□□ 0.58
SCG3Q8WXD2 AC112777.1-201ENST00000540175 1423 ntBASIC18.67■□□□□ 0.58
SCG3Q8WXD2 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCG3Q8WXD2 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCG3Q8WXD2 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.67■□□□□ 0.58
SCG3Q8WXD2 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCG3Q8WXD2 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCG3Q8WXD2 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCG3Q8WXD2 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCG3Q8WXD2 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCG3Q8WXD2 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SCG3Q8WXD2 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCG3Q8WXD2 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.67■□□□□ 0.58
SCG3Q8WXD2 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
SCG3Q8WXD2 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.67■□□□□ 0.58
SCG3Q8WXD2 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.67■□□□□ 0.58
SCG3Q8WXD2 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.67■□□□□ 0.58
SCG3Q8WXD2 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCG3Q8WXD2 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCG3Q8WXD2 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.67■□□□□ 0.58
SCG3Q8WXD2 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SCG3Q8WXD2 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SCG3Q8WXD2 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SCG3Q8WXD2 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SCG3Q8WXD2 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.66■□□□□ 0.58
SCG3Q8WXD2 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCG3Q8WXD2 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SCG3Q8WXD2 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCG3Q8WXD2 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.66■□□□□ 0.58
SCG3Q8WXD2 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCG3Q8WXD2 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCG3Q8WXD2 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCG3Q8WXD2 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCG3Q8WXD2 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCG3Q8WXD2 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCG3Q8WXD2 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCG3Q8WXD2 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.66■□□□□ 0.58
SCG3Q8WXD2 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.66■□□□□ 0.58
SCG3Q8WXD2 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.66■□□□□ 0.58
SCG3Q8WXD2 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SCG3Q8WXD2 HOMER2P1-201ENST00000455653 964 ntBASIC18.66■□□□□ 0.58
SCG3Q8WXD2 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCG3Q8WXD2 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SCG3Q8WXD2 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.66■□□□□ 0.58
SCG3Q8WXD2 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.66■□□□□ 0.58
SCG3Q8WXD2 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.66■□□□□ 0.58
SCG3Q8WXD2 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.66■□□□□ 0.58
SCG3Q8WXD2 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
SCG3Q8WXD2 AC091076.1-201ENST00000610741 619 ntBASIC18.66■□□□□ 0.58
SCG3Q8WXD2 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SCG3Q8WXD2 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.66■□□□□ 0.58
SCG3Q8WXD2 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCG3Q8WXD2 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCG3Q8WXD2 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCG3Q8WXD2 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCG3Q8WXD2 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SCG3Q8WXD2 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
SCG3Q8WXD2 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.66■□□□□ 0.58
SCG3Q8WXD2 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SCG3Q8WXD2 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
SCG3Q8WXD2 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.66■□□□□ 0.58
SCG3Q8WXD2 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SCG3Q8WXD2 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCG3Q8WXD2 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCG3Q8WXD2 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCG3Q8WXD2 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.65■□□□□ 0.58
SCG3Q8WXD2 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SCG3Q8WXD2 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCG3Q8WXD2 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
SCG3Q8WXD2 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.65■□□□□ 0.58
SCG3Q8WXD2 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.65■□□□□ 0.58
SCG3Q8WXD2 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.65■□□□□ 0.58
SCG3Q8WXD2 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms