Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
RTN4IP1Q8WWV3 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC15.38■□□□□ 0.05
RTN4IP1Q8WWV3 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RTN4IP1Q8WWV3 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC15.38■□□□□ 0.05
RTN4IP1Q8WWV3 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
RTN4IP1Q8WWV3 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC15.38■□□□□ 0.05
RTN4IP1Q8WWV3 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
RTN4IP1Q8WWV3 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
RTN4IP1Q8WWV3 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RTN4IP1Q8WWV3 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RTN4IP1Q8WWV3 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RTN4IP1Q8WWV3 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
RTN4IP1Q8WWV3 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RTN4IP1Q8WWV3 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.37■□□□□ 0.05
RTN4IP1Q8WWV3 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RTN4IP1Q8WWV3 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.37■□□□□ 0.05
RTN4IP1Q8WWV3 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RTN4IP1Q8WWV3 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RTN4IP1Q8WWV3 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RTN4IP1Q8WWV3 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
RTN4IP1Q8WWV3 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RTN4IP1Q8WWV3 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RTN4IP1Q8WWV3 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
RTN4IP1Q8WWV3 AP000692.2-201ENST00000608391 879 ntBASIC15.37■□□□□ 0.05
RTN4IP1Q8WWV3 REXO1L10P-201ENST00000615707 1290 ntBASIC15.37■□□□□ 0.05
RTN4IP1Q8WWV3 REXO1L12P-201ENST00000622156 912 ntBASIC15.37■□□□□ 0.05
RTN4IP1Q8WWV3 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RTN4IP1Q8WWV3 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RTN4IP1Q8WWV3 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC15.37■□□□□ 0.05
RTN4IP1Q8WWV3 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RTN4IP1Q8WWV3 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.37■□□□□ 0.05
RTN4IP1Q8WWV3 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RTN4IP1Q8WWV3 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RTN4IP1Q8WWV3 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RTN4IP1Q8WWV3 SIRPAP1-201ENST00000448467 1770 ntBASIC15.36■□□□□ 0.05
RTN4IP1Q8WWV3 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
RTN4IP1Q8WWV3 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.36■□□□□ 0.05
RTN4IP1Q8WWV3 AC008556.1-201ENST00000610908 2040 ntBASIC15.36■□□□□ 0.05
RTN4IP1Q8WWV3 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
RTN4IP1Q8WWV3 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC15.36■□□□□ 0.05
RTN4IP1Q8WWV3 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RTN4IP1Q8WWV3 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
RTN4IP1Q8WWV3 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RTN4IP1Q8WWV3 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC15.36■□□□□ 0.05
RTN4IP1Q8WWV3 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
RTN4IP1Q8WWV3 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RTN4IP1Q8WWV3 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RTN4IP1Q8WWV3 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RTN4IP1Q8WWV3 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC15.36■□□□□ 0.05
RTN4IP1Q8WWV3 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RTN4IP1Q8WWV3 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC15.36■□□□□ 0.05
RTN4IP1Q8WWV3 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC15.36■□□□□ 0.05
RTN4IP1Q8WWV3 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RTN4IP1Q8WWV3 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.36■□□□□ 0.05
RTN4IP1Q8WWV3 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
RTN4IP1Q8WWV3 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
RTN4IP1Q8WWV3 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RTN4IP1Q8WWV3 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RTN4IP1Q8WWV3 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RTN4IP1Q8WWV3 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC15.36■□□□□ 0.05
RTN4IP1Q8WWV3 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RTN4IP1Q8WWV3 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
RTN4IP1Q8WWV3 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RTN4IP1Q8WWV3 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC15.36■□□□□ 0.05
RTN4IP1Q8WWV3 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RTN4IP1Q8WWV3 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.36■□□□□ 0.05
RTN4IP1Q8WWV3 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.36■□□□□ 0.05
RTN4IP1Q8WWV3 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RTN4IP1Q8WWV3 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RTN4IP1Q8WWV3 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
RTN4IP1Q8WWV3 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
RTN4IP1Q8WWV3 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
RTN4IP1Q8WWV3 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RTN4IP1Q8WWV3 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.35■□□□□ 0.05
RTN4IP1Q8WWV3 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RTN4IP1Q8WWV3 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RTN4IP1Q8WWV3 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
RTN4IP1Q8WWV3 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RTN4IP1Q8WWV3 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RTN4IP1Q8WWV3 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
RTN4IP1Q8WWV3 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RTN4IP1Q8WWV3 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RTN4IP1Q8WWV3 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.35■□□□□ 0.05
RTN4IP1Q8WWV3 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC15.35■□□□□ 0.05
RTN4IP1Q8WWV3 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC15.35■□□□□ 0.05
RTN4IP1Q8WWV3 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
RTN4IP1Q8WWV3 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
RTN4IP1Q8WWV3 DHDH-203ENST00000522614 776 ntTSL 5 BASIC15.35■□□□□ 0.05
RTN4IP1Q8WWV3 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
RTN4IP1Q8WWV3 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC15.35■□□□□ 0.05
RTN4IP1Q8WWV3 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC15.35■□□□□ 0.05
RTN4IP1Q8WWV3 AP003071.4-201ENST00000562276 1284 ntBASIC15.35■□□□□ 0.05
RTN4IP1Q8WWV3 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC15.35■□□□□ 0.05
RTN4IP1Q8WWV3 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC15.35■□□□□ 0.05
RTN4IP1Q8WWV3 MIR4785-201ENST00000585005 73 ntBASIC15.35■□□□□ 0.05
RTN4IP1Q8WWV3 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC15.35■□□□□ 0.05
RTN4IP1Q8WWV3 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
RTN4IP1Q8WWV3 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RTN4IP1Q8WWV3 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RTN4IP1Q8WWV3 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms