Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.46■□□□□ 0.55
PTCD2Q8WV60 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PTCD2Q8WV60 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.46■□□□□ 0.55
PTCD2Q8WV60 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.46■□□□□ 0.55
PTCD2Q8WV60 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.46■□□□□ 0.55
PTCD2Q8WV60 AP003400.6-201ENST00000624698 740 ntBASIC18.46■□□□□ 0.55
PTCD2Q8WV60 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
PTCD2Q8WV60 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTCD2Q8WV60 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTCD2Q8WV60 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.46■□□□□ 0.55
PTCD2Q8WV60 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PTCD2Q8WV60 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTCD2Q8WV60 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PTCD2Q8WV60 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PTCD2Q8WV60 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
PTCD2Q8WV60 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
PTCD2Q8WV60 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.46■□□□□ 0.54
PTCD2Q8WV60 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.45■□□□□ 0.54
PTCD2Q8WV60 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PTCD2Q8WV60 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
PTCD2Q8WV60 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTCD2Q8WV60 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTCD2Q8WV60 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.45■□□□□ 0.54
PTCD2Q8WV60 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTCD2Q8WV60 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.45■□□□□ 0.54
PTCD2Q8WV60 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTCD2Q8WV60 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.45■□□□□ 0.54
PTCD2Q8WV60 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTCD2Q8WV60 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.45■□□□□ 0.54
PTCD2Q8WV60 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PTCD2Q8WV60 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.45■□□□□ 0.54
PTCD2Q8WV60 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.45■□□□□ 0.54
PTCD2Q8WV60 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.45■□□□□ 0.54
PTCD2Q8WV60 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.45■□□□□ 0.54
PTCD2Q8WV60 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.45■□□□□ 0.54
PTCD2Q8WV60 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.45■□□□□ 0.54
PTCD2Q8WV60 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.45■□□□□ 0.54
PTCD2Q8WV60 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.45■□□□□ 0.54
PTCD2Q8WV60 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PTCD2Q8WV60 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.45■□□□□ 0.54
PTCD2Q8WV60 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.45■□□□□ 0.54
PTCD2Q8WV60 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
PTCD2Q8WV60 AL031432.5-201ENST00000641059 760 ntBASIC18.45■□□□□ 0.54
PTCD2Q8WV60 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTCD2Q8WV60 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTCD2Q8WV60 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
PTCD2Q8WV60 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
PTCD2Q8WV60 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.45■□□□□ 0.54
PTCD2Q8WV60 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
PTCD2Q8WV60 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PTCD2Q8WV60 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.45■□□□□ 0.54
PTCD2Q8WV60 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.45■□□□□ 0.54
PTCD2Q8WV60 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.45■□□□□ 0.54
PTCD2Q8WV60 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
PTCD2Q8WV60 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.45■□□□□ 0.54
PTCD2Q8WV60 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTCD2Q8WV60 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTCD2Q8WV60 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTCD2Q8WV60 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTCD2Q8WV60 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.44■□□□□ 0.54
PTCD2Q8WV60 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PTCD2Q8WV60 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.44■□□□□ 0.54
PTCD2Q8WV60 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTCD2Q8WV60 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.44■□□□□ 0.54
PTCD2Q8WV60 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PTCD2Q8WV60 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
PTCD2Q8WV60 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTCD2Q8WV60 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTCD2Q8WV60 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.44■□□□□ 0.54
PTCD2Q8WV60 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PTCD2Q8WV60 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PTCD2Q8WV60 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTCD2Q8WV60 AP000523.1-201ENST00000398242 1049 ntBASIC18.44■□□□□ 0.54
PTCD2Q8WV60 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PTCD2Q8WV60 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.44■□□□□ 0.54
PTCD2Q8WV60 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.44■□□□□ 0.54
PTCD2Q8WV60 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
PTCD2Q8WV60 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PTCD2Q8WV60 HYMAI.1-201ENST00000620949 238 ntBASIC18.44■□□□□ 0.54
PTCD2Q8WV60 CFTRP2-201ENST00000634304 199 ntBASIC18.44■□□□□ 0.54
PTCD2Q8WV60 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTCD2Q8WV60 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTCD2Q8WV60 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PTCD2Q8WV60 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PTCD2Q8WV60 PHGDH-209ENST00000641074 1780 ntBASIC18.44■□□□□ 0.54
PTCD2Q8WV60 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PTCD2Q8WV60 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTCD2Q8WV60 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.44■□□□□ 0.54
PTCD2Q8WV60 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTCD2Q8WV60 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.44■□□□□ 0.54
PTCD2Q8WV60 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PTCD2Q8WV60 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTCD2Q8WV60 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTCD2Q8WV60 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PTCD2Q8WV60 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PTCD2Q8WV60 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PTCD2Q8WV60 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.43■□□□□ 0.54
PTCD2Q8WV60 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PTCD2Q8WV60 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTCD2Q8WV60 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms