Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCHCR1Q8TD31 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCHCR1Q8TD31 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCHCR1Q8TD31 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCHCR1Q8TD31 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCHCR1Q8TD31 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCHCR1Q8TD31 MIR564-202ENST00000385049 94 ntBASIC19.01■□□□□ 0.63
CCHCR1Q8TD31 CA15P1-201ENST00000481698 905 ntBASIC19.01■□□□□ 0.63
CCHCR1Q8TD31 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCHCR1Q8TD31 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.01■□□□□ 0.63
CCHCR1Q8TD31 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCHCR1Q8TD31 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.01■□□□□ 0.63
CCHCR1Q8TD31 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.01■□□□□ 0.63
CCHCR1Q8TD31 REXO1L9P-201ENST00000604264 2108 ntBASIC19.01■□□□□ 0.63
CCHCR1Q8TD31 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CCHCR1Q8TD31 GMCL1P1-201ENST00000463439 1581 ntBASIC19.01■□□□□ 0.63
CCHCR1Q8TD31 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCHCR1Q8TD31 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CCHCR1Q8TD31 AC134043.2-201ENST00000624206 2238 ntBASIC19.01■□□□□ 0.63
CCHCR1Q8TD31 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.01■□□□□ 0.63
CCHCR1Q8TD31 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCHCR1Q8TD31 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCHCR1Q8TD31 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCHCR1Q8TD31 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCHCR1Q8TD31 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CCHCR1Q8TD31 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CCHCR1Q8TD31 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19■□□□□ 0.63
CCHCR1Q8TD31 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CCHCR1Q8TD31 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCHCR1Q8TD31 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCHCR1Q8TD31 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CCHCR1Q8TD31 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCHCR1Q8TD31 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCHCR1Q8TD31 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19■□□□□ 0.63
CCHCR1Q8TD31 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CCHCR1Q8TD31 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19■□□□□ 0.63
CCHCR1Q8TD31 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19■□□□□ 0.63
CCHCR1Q8TD31 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCHCR1Q8TD31 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCHCR1Q8TD31 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19■□□□□ 0.63
CCHCR1Q8TD31 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CCHCR1Q8TD31 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CCHCR1Q8TD31 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCHCR1Q8TD31 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCHCR1Q8TD31 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
CCHCR1Q8TD31 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCHCR1Q8TD31 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19■□□□□ 0.63
CCHCR1Q8TD31 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CCHCR1Q8TD31 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCHCR1Q8TD31 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CCHCR1Q8TD31 AC034236.2-201ENST00000606662 1610 ntBASIC19■□□□□ 0.63
CCHCR1Q8TD31 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCHCR1Q8TD31 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19■□□□□ 0.63
CCHCR1Q8TD31 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCHCR1Q8TD31 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCHCR1Q8TD31 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCHCR1Q8TD31 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CCHCR1Q8TD31 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.99■□□□□ 0.63
CCHCR1Q8TD31 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.99■□□□□ 0.63
CCHCR1Q8TD31 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCHCR1Q8TD31 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCHCR1Q8TD31 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.99■□□□□ 0.63
CCHCR1Q8TD31 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.99■□□□□ 0.63
CCHCR1Q8TD31 SLC25A1P2-201ENST00000430693 912 ntBASIC18.99■□□□□ 0.63
CCHCR1Q8TD31 CCR12P-201ENST00000446203 998 ntBASIC18.99■□□□□ 0.63
CCHCR1Q8TD31 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCHCR1Q8TD31 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.99■□□□□ 0.63
CCHCR1Q8TD31 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.99■□□□□ 0.63
CCHCR1Q8TD31 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
CCHCR1Q8TD31 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCHCR1Q8TD31 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CCHCR1Q8TD31 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.99■□□□□ 0.63
CCHCR1Q8TD31 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.99■□□□□ 0.63
CCHCR1Q8TD31 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCHCR1Q8TD31 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
CCHCR1Q8TD31 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
CCHCR1Q8TD31 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.99■□□□□ 0.63
CCHCR1Q8TD31 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CCHCR1Q8TD31 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCHCR1Q8TD31 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.99■□□□□ 0.63
CCHCR1Q8TD31 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CCHCR1Q8TD31 SIRPAP1-201ENST00000448467 1770 ntBASIC18.98■□□□□ 0.63
CCHCR1Q8TD31 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.98■□□□□ 0.63
CCHCR1Q8TD31 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.98■□□□□ 0.63
CCHCR1Q8TD31 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCHCR1Q8TD31 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCHCR1Q8TD31 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CCHCR1Q8TD31 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.98■□□□□ 0.63
CCHCR1Q8TD31 AC087499.1-201ENST00000418141 1075 ntBASIC18.98■□□□□ 0.63
CCHCR1Q8TD31 MCCD1P1-208ENST00000445732 328 ntBASIC18.98■□□□□ 0.63
CCHCR1Q8TD31 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.98■□□□□ 0.63
CCHCR1Q8TD31 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
CCHCR1Q8TD31 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.98■□□□□ 0.63
CCHCR1Q8TD31 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CCHCR1Q8TD31 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.98■□□□□ 0.63
CCHCR1Q8TD31 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.98■□□□□ 0.63
CCHCR1Q8TD31 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCHCR1Q8TD31 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCHCR1Q8TD31 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.98■□□□□ 0.63
CCHCR1Q8TD31 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms