Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SMARCC2Q8TAQ2 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC21.34■■□□□ 1.01
SMARCC2Q8TAQ2 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SMARCC2Q8TAQ2 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SMARCC2Q8TAQ2 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SMARCC2Q8TAQ2 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SMARCC2Q8TAQ2 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC21.34■■□□□ 1.01
SMARCC2Q8TAQ2 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SMARCC2Q8TAQ2 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SMARCC2Q8TAQ2 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
SMARCC2Q8TAQ2 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SMARCC2Q8TAQ2 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SMARCC2Q8TAQ2 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SMARCC2Q8TAQ2 STARP1-201ENST00000397973 869 ntBASIC21.34■■□□□ 1.01
SMARCC2Q8TAQ2 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SMARCC2Q8TAQ2 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SMARCC2Q8TAQ2 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SMARCC2Q8TAQ2 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SMARCC2Q8TAQ2 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
SMARCC2Q8TAQ2 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SMARCC2Q8TAQ2 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SMARCC2Q8TAQ2 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SMARCC2Q8TAQ2 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SMARCC2Q8TAQ2 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC21.34■■□□□ 1.01
SMARCC2Q8TAQ2 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SMARCC2Q8TAQ2 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SMARCC2Q8TAQ2 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SMARCC2Q8TAQ2 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC21.34■■□□□ 1.01
SMARCC2Q8TAQ2 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SMARCC2Q8TAQ2 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SMARCC2Q8TAQ2 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
SMARCC2Q8TAQ2 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
SMARCC2Q8TAQ2 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SMARCC2Q8TAQ2 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
SMARCC2Q8TAQ2 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SMARCC2Q8TAQ2 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SMARCC2Q8TAQ2 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SMARCC2Q8TAQ2 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SMARCC2Q8TAQ2 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SMARCC2Q8TAQ2 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SMARCC2Q8TAQ2 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC21.33■■□□□ 1.01
SMARCC2Q8TAQ2 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC21.33■■□□□ 1.01
SMARCC2Q8TAQ2 AC026471.1-201ENST00000564629 3026 ntBASIC21.33■■□□□ 1.01
SMARCC2Q8TAQ2 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
SMARCC2Q8TAQ2 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
SMARCC2Q8TAQ2 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SMARCC2Q8TAQ2 AL031133.1-201ENST00000406807 723 ntBASIC21.33■■□□□ 1.01
SMARCC2Q8TAQ2 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SMARCC2Q8TAQ2 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
SMARCC2Q8TAQ2 AC112907.2-201ENST00000448639 330 ntBASIC21.33■■□□□ 1.01
SMARCC2Q8TAQ2 SEC1P-202ENST00000473944 940 ntBASIC21.33■■□□□ 1.01
SMARCC2Q8TAQ2 AC034232.1-201ENST00000506026 1064 ntBASIC21.33■■□□□ 1.01
SMARCC2Q8TAQ2 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC21.33■■□□□ 1.01
SMARCC2Q8TAQ2 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC21.33■■□□□ 1.01
SMARCC2Q8TAQ2 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
SMARCC2Q8TAQ2 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC21.33■■□□□ 1.01
SMARCC2Q8TAQ2 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SMARCC2Q8TAQ2 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SMARCC2Q8TAQ2 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
SMARCC2Q8TAQ2 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SMARCC2Q8TAQ2 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC21.33■■□□□ 1
SMARCC2Q8TAQ2 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1
SMARCC2Q8TAQ2 AL024508.2-201ENST00000607749 1894 ntBASIC21.32■■□□□ 1
SMARCC2Q8TAQ2 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC21.32■■□□□ 1
SMARCC2Q8TAQ2 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC21.32■■□□□ 1
SMARCC2Q8TAQ2 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
SMARCC2Q8TAQ2 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SMARCC2Q8TAQ2 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SMARCC2Q8TAQ2 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
SMARCC2Q8TAQ2 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC21.32■■□□□ 1
SMARCC2Q8TAQ2 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SMARCC2Q8TAQ2 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SMARCC2Q8TAQ2 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC21.32■■□□□ 1
SMARCC2Q8TAQ2 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC21.32■■□□□ 1
SMARCC2Q8TAQ2 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
SMARCC2Q8TAQ2 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC21.32■■□□□ 1
SMARCC2Q8TAQ2 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC21.32■■□□□ 1
SMARCC2Q8TAQ2 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC21.32■■□□□ 1
SMARCC2Q8TAQ2 SPDYE15P-201ENST00000424157 909 ntBASIC21.32■■□□□ 1
SMARCC2Q8TAQ2 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC21.32■■□□□ 1
SMARCC2Q8TAQ2 AL671277.2-201ENST00000458060 996 ntBASIC21.32■■□□□ 1
SMARCC2Q8TAQ2 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
SMARCC2Q8TAQ2 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC21.32■■□□□ 1
SMARCC2Q8TAQ2 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC21.32■■□□□ 1
SMARCC2Q8TAQ2 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21.32■■□□□ 1
SMARCC2Q8TAQ2 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
SMARCC2Q8TAQ2 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC21.32■■□□□ 1
SMARCC2Q8TAQ2 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
SMARCC2Q8TAQ2 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SMARCC2Q8TAQ2 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SMARCC2Q8TAQ2 AC093010.1-201ENST00000473625 1624 ntBASIC21.32■■□□□ 1
SMARCC2Q8TAQ2 PCDHB18P-201ENST00000524813 2368 ntBASIC21.32■■□□□ 1
SMARCC2Q8TAQ2 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SMARCC2Q8TAQ2 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SMARCC2Q8TAQ2 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
SMARCC2Q8TAQ2 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC21.31■■□□□ 1
SMARCC2Q8TAQ2 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC21.31■■□□□ 1
SMARCC2Q8TAQ2 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC21.31■■□□□ 1
SMARCC2Q8TAQ2 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
SMARCC2Q8TAQ2 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms