Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH19Q8TAB3 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
PCDH19Q8TAB3 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.82■□□□□ 0.6
PCDH19Q8TAB3 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH19Q8TAB3 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PCDH19Q8TAB3 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH19Q8TAB3 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH19Q8TAB3 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
PCDH19Q8TAB3 PVRIG2P-201ENST00000435460 978 ntBASIC18.82■□□□□ 0.6
PCDH19Q8TAB3 COX11P1-201ENST00000489116 835 ntBASIC18.82■□□□□ 0.6
PCDH19Q8TAB3 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.82■□□□□ 0.6
PCDH19Q8TAB3 NTF6B-201ENST00000591913 560 ntBASIC18.82■□□□□ 0.6
PCDH19Q8TAB3 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
PCDH19Q8TAB3 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH19Q8TAB3 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH19Q8TAB3 AC005332.8-201ENST00000622750 2735 ntBASIC18.82■□□□□ 0.6
PCDH19Q8TAB3 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDH19Q8TAB3 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PCDH19Q8TAB3 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDH19Q8TAB3 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH19Q8TAB3 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH19Q8TAB3 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.82■□□□□ 0.6
PCDH19Q8TAB3 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH19Q8TAB3 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH19Q8TAB3 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH19Q8TAB3 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.81■□□□□ 0.6
PCDH19Q8TAB3 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
PCDH19Q8TAB3 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH19Q8TAB3 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PCDH19Q8TAB3 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.81■□□□□ 0.6
PCDH19Q8TAB3 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH19Q8TAB3 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH19Q8TAB3 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDH19Q8TAB3 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDH19Q8TAB3 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.81■□□□□ 0.6
PCDH19Q8TAB3 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDH19Q8TAB3 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDH19Q8TAB3 AC140113.3-201ENST00000605663 199 ntBASIC18.81■□□□□ 0.6
PCDH19Q8TAB3 AC011558.1-201ENST00000623459 338 ntBASIC18.81■□□□□ 0.6
PCDH19Q8TAB3 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PCDH19Q8TAB3 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH19Q8TAB3 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH19Q8TAB3 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PCDH19Q8TAB3 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH19Q8TAB3 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH19Q8TAB3 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH19Q8TAB3 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH19Q8TAB3 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.81■□□□□ 0.6
PCDH19Q8TAB3 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH19Q8TAB3 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH19Q8TAB3 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
PCDH19Q8TAB3 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDH19Q8TAB3 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH19Q8TAB3 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH19Q8TAB3 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PCDH19Q8TAB3 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDH19Q8TAB3 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH19Q8TAB3 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH19Q8TAB3 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.8■□□□□ 0.6
PCDH19Q8TAB3 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDH19Q8TAB3 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH19Q8TAB3 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDH19Q8TAB3 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDH19Q8TAB3 AC139887.4-201ENST00000607877 719 ntBASIC18.8■□□□□ 0.6
PCDH19Q8TAB3 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH19Q8TAB3 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PCDH19Q8TAB3 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDH19Q8TAB3 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH19Q8TAB3 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH19Q8TAB3 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH19Q8TAB3 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH19Q8TAB3 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH19Q8TAB3 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH19Q8TAB3 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.8■□□□□ 0.6
PCDH19Q8TAB3 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH19Q8TAB3 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDH19Q8TAB3 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH19Q8TAB3 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH19Q8TAB3 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH19Q8TAB3 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH19Q8TAB3 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH19Q8TAB3 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH19Q8TAB3 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.79■□□□□ 0.6
PCDH19Q8TAB3 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.79■□□□□ 0.6
PCDH19Q8TAB3 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.79■□□□□ 0.6
PCDH19Q8TAB3 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.79■□□□□ 0.6
PCDH19Q8TAB3 BX664615.1-201ENST00000443558 458 ntBASIC18.79■□□□□ 0.6
PCDH19Q8TAB3 RASA4DP-201ENST00000460726 1199 ntBASIC18.79■□□□□ 0.6
PCDH19Q8TAB3 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.79■□□□□ 0.6
PCDH19Q8TAB3 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
PCDH19Q8TAB3 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
PCDH19Q8TAB3 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PCDH19Q8TAB3 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH19Q8TAB3 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH19Q8TAB3 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH19Q8TAB3 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH19Q8TAB3 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDH19Q8TAB3 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH19Q8TAB3 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
PCDH19Q8TAB3 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms