Protein–RNA interactions for Protein: Q8NF99

ZNF397, Zinc finger protein 397, humanhuman

Predicted RBP Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF397Q8NF99 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.18■□□□□ 0.82
ZNF397Q8NF99 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC20.18■□□□□ 0.82
ZNF397Q8NF99 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF397Q8NF99 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF397Q8NF99 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF397Q8NF99 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF397Q8NF99 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF397Q8NF99 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF397Q8NF99 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF397Q8NF99 Z99916.2-201ENST00000604037 246 ntBASIC20.18■□□□□ 0.82
ZNF397Q8NF99 AP001412.1-201ENST00000608405 714 ntBASIC20.18■□□□□ 0.82
ZNF397Q8NF99 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.18■□□□□ 0.82
ZNF397Q8NF99 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.18■□□□□ 0.82
ZNF397Q8NF99 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.18■□□□□ 0.82
ZNF397Q8NF99 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF397Q8NF99 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
ZNF397Q8NF99 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF397Q8NF99 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
ZNF397Q8NF99 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
ZNF397Q8NF99 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF397Q8NF99 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF397Q8NF99 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF397Q8NF99 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF397Q8NF99 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.18■□□□□ 0.82
ZNF397Q8NF99 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF397Q8NF99 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF397Q8NF99 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC20.18■□□□□ 0.82
ZNF397Q8NF99 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF397Q8NF99 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.18■□□□□ 0.82
ZNF397Q8NF99 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF397Q8NF99 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF397Q8NF99 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF397Q8NF99 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF397Q8NF99 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF397Q8NF99 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF397Q8NF99 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF397Q8NF99 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC20.17■□□□□ 0.82
ZNF397Q8NF99 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
ZNF397Q8NF99 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF397Q8NF99 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.17■□□□□ 0.82
ZNF397Q8NF99 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF397Q8NF99 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF397Q8NF99 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF397Q8NF99 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.17■□□□□ 0.82
ZNF397Q8NF99 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF397Q8NF99 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF397Q8NF99 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF397Q8NF99 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.17■□□□□ 0.82
ZNF397Q8NF99 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.17■□□□□ 0.82
ZNF397Q8NF99 AC113410.3-201ENST00000623366 203 ntBASIC20.17■□□□□ 0.82
ZNF397Q8NF99 CR392000.1-201ENST00000624770 1228 ntBASIC20.17■□□□□ 0.82
ZNF397Q8NF99 AP006294.2-201ENST00000641667 209 ntBASIC20.17■□□□□ 0.82
ZNF397Q8NF99 AL049637.2-201ENST00000641778 930 ntBASIC20.17■□□□□ 0.82
ZNF397Q8NF99 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF397Q8NF99 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC20.17■□□□□ 0.82
ZNF397Q8NF99 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.17■□□□□ 0.82
ZNF397Q8NF99 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.17■□□□□ 0.82
ZNF397Q8NF99 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF397Q8NF99 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF397Q8NF99 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF397Q8NF99 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
ZNF397Q8NF99 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.17■□□□□ 0.82
ZNF397Q8NF99 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF397Q8NF99 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.17■□□□□ 0.82
ZNF397Q8NF99 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF397Q8NF99 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF397Q8NF99 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF397Q8NF99 MYLKP1-201ENST00000509077 1580 ntBASIC20.17■□□□□ 0.82
ZNF397Q8NF99 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.17■□□□□ 0.82
ZNF397Q8NF99 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF397Q8NF99 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF397Q8NF99 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
ZNF397Q8NF99 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF397Q8NF99 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF397Q8NF99 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.16■□□□□ 0.82
ZNF397Q8NF99 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
ZNF397Q8NF99 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
ZNF397Q8NF99 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF397Q8NF99 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF397Q8NF99 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF397Q8NF99 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.16■□□□□ 0.82
ZNF397Q8NF99 CKBP1-201ENST00000565489 1086 ntBASIC20.16■□□□□ 0.82
ZNF397Q8NF99 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.16■□□□□ 0.82
ZNF397Q8NF99 AL031985.4-201ENST00000642138 673 ntBASIC20.16■□□□□ 0.82
ZNF397Q8NF99 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF397Q8NF99 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF397Q8NF99 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF397Q8NF99 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF397Q8NF99 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF397Q8NF99 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF397Q8NF99 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF397Q8NF99 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
ZNF397Q8NF99 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
ZNF397Q8NF99 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF397Q8NF99 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF397Q8NF99 AC093677.2-201ENST00000600169 1863 ntBASIC20.16■□□□□ 0.82
ZNF397Q8NF99 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF397Q8NF99 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
ZNF397Q8NF99 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF397Q8NF99 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms