Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DNAAF1Q8NEP3 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.07■□□□□ 0.16
DNAAF1Q8NEP3 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.07■□□□□ 0.16
DNAAF1Q8NEP3 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DNAAF1Q8NEP3 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.07■□□□□ 0.16
DNAAF1Q8NEP3 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
DNAAF1Q8NEP3 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
DNAAF1Q8NEP3 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.07■□□□□ 0.16
DNAAF1Q8NEP3 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DNAAF1Q8NEP3 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DNAAF1Q8NEP3 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.07■□□□□ 0.16
DNAAF1Q8NEP3 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
DNAAF1Q8NEP3 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
DNAAF1Q8NEP3 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
DNAAF1Q8NEP3 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
DNAAF1Q8NEP3 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
DNAAF1Q8NEP3 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.06■□□□□ 0.16
DNAAF1Q8NEP3 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
DNAAF1Q8NEP3 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
DNAAF1Q8NEP3 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.06■□□□□ 0.16
DNAAF1Q8NEP3 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.06■□□□□ 0.16
DNAAF1Q8NEP3 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
DNAAF1Q8NEP3 AL135905.2-201ENST00000584934 1404 ntBASIC16.06■□□□□ 0.16
DNAAF1Q8NEP3 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
DNAAF1Q8NEP3 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC16.06■□□□□ 0.16
DNAAF1Q8NEP3 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC16.06■□□□□ 0.16
DNAAF1Q8NEP3 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
DNAAF1Q8NEP3 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16.06■□□□□ 0.16
DNAAF1Q8NEP3 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
DNAAF1Q8NEP3 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
DNAAF1Q8NEP3 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
DNAAF1Q8NEP3 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.06■□□□□ 0.16
DNAAF1Q8NEP3 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
DNAAF1Q8NEP3 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
DNAAF1Q8NEP3 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
DNAAF1Q8NEP3 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
DNAAF1Q8NEP3 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
DNAAF1Q8NEP3 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
DNAAF1Q8NEP3 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DNAAF1Q8NEP3 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.05■□□□□ 0.16
DNAAF1Q8NEP3 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
DNAAF1Q8NEP3 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
DNAAF1Q8NEP3 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
DNAAF1Q8NEP3 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.05■□□□□ 0.16
DNAAF1Q8NEP3 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DNAAF1Q8NEP3 MYLKP1-201ENST00000509077 1580 ntBASIC16.05■□□□□ 0.16
DNAAF1Q8NEP3 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
DNAAF1Q8NEP3 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
DNAAF1Q8NEP3 AC099343.3-201ENST00000605834 2503 ntBASIC16.05■□□□□ 0.16
DNAAF1Q8NEP3 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
DNAAF1Q8NEP3 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
DNAAF1Q8NEP3 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
DNAAF1Q8NEP3 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.05■□□□□ 0.16
DNAAF1Q8NEP3 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
DNAAF1Q8NEP3 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
DNAAF1Q8NEP3 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
DNAAF1Q8NEP3 FAM207BP-201ENST00000447172 505 ntBASIC16.05■□□□□ 0.16
DNAAF1Q8NEP3 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
DNAAF1Q8NEP3 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.05■□□□□ 0.16
DNAAF1Q8NEP3 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.05■□□□□ 0.16
DNAAF1Q8NEP3 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.05■□□□□ 0.16
DNAAF1Q8NEP3 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DNAAF1Q8NEP3 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DNAAF1Q8NEP3 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DNAAF1Q8NEP3 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DNAAF1Q8NEP3 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DNAAF1Q8NEP3 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
DNAAF1Q8NEP3 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
DNAAF1Q8NEP3 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DNAAF1Q8NEP3 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DNAAF1Q8NEP3 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.05■□□□□ 0.16
DNAAF1Q8NEP3 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
DNAAF1Q8NEP3 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
DNAAF1Q8NEP3 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
DNAAF1Q8NEP3 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DNAAF1Q8NEP3 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DNAAF1Q8NEP3 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
DNAAF1Q8NEP3 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.04■□□□□ 0.16
DNAAF1Q8NEP3 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DNAAF1Q8NEP3 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.04■□□□□ 0.16
DNAAF1Q8NEP3 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
DNAAF1Q8NEP3 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.04■□□□□ 0.16
DNAAF1Q8NEP3 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DNAAF1Q8NEP3 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
DNAAF1Q8NEP3 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.04■□□□□ 0.16
DNAAF1Q8NEP3 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DNAAF1Q8NEP3 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC16.04■□□□□ 0.16
DNAAF1Q8NEP3 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.04■□□□□ 0.16
DNAAF1Q8NEP3 MIR4651-201ENST00000582622 73 ntBASIC16.04■□□□□ 0.16
DNAAF1Q8NEP3 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.04■□□□□ 0.16
DNAAF1Q8NEP3 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
DNAAF1Q8NEP3 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
DNAAF1Q8NEP3 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DNAAF1Q8NEP3 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DNAAF1Q8NEP3 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.04■□□□□ 0.16
DNAAF1Q8NEP3 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
DNAAF1Q8NEP3 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.04■□□□□ 0.16
DNAAF1Q8NEP3 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.04■□□□□ 0.16
DNAAF1Q8NEP3 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
DNAAF1Q8NEP3 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms