Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
ZNF439Q8NDP4 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
ZNF439Q8NDP4 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF439Q8NDP4 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF439Q8NDP4 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF439Q8NDP4 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF439Q8NDP4 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
ZNF439Q8NDP4 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF439Q8NDP4 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF439Q8NDP4 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF439Q8NDP4 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC15.11■□□□□ 0.01
ZNF439Q8NDP4 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF439Q8NDP4 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
ZNF439Q8NDP4 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF439Q8NDP4 KRT18P23-201ENST00000435622 1283 ntBASIC15.11■□□□□ 0.01
ZNF439Q8NDP4 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF439Q8NDP4 AC128688.1-201ENST00000487626 519 ntBASIC15.11■□□□□ 0.01
ZNF439Q8NDP4 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF439Q8NDP4 NAPSB-206ENST00000562112 1266 ntBASIC15.11■□□□□ 0.01
ZNF439Q8NDP4 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
ZNF439Q8NDP4 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF439Q8NDP4 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF439Q8NDP4 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF439Q8NDP4 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF439Q8NDP4 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF439Q8NDP4 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF439Q8NDP4 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC15.11■□□□□ 0.01
ZNF439Q8NDP4 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
ZNF439Q8NDP4 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
ZNF439Q8NDP4 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF439Q8NDP4 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF439Q8NDP4 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF439Q8NDP4 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF439Q8NDP4 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF439Q8NDP4 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF439Q8NDP4 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF439Q8NDP4 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF439Q8NDP4 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
ZNF439Q8NDP4 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
ZNF439Q8NDP4 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF439Q8NDP4 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF439Q8NDP4 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF439Q8NDP4 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC15.1■□□□□ 0.01
ZNF439Q8NDP4 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC15.1■□□□□ 0.01
ZNF439Q8NDP4 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF439Q8NDP4 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC15.1■□□□□ 0.01
ZNF439Q8NDP4 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF439Q8NDP4 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF439Q8NDP4 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
ZNF439Q8NDP4 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF439Q8NDP4 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.1■□□□□ 0.01
ZNF439Q8NDP4 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
ZNF439Q8NDP4 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
ZNF439Q8NDP4 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF439Q8NDP4 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
ZNF439Q8NDP4 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
ZNF439Q8NDP4 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC15.1■□□□□ 0.01
ZNF439Q8NDP4 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC15.1■□□□□ 0.01
ZNF439Q8NDP4 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
ZNF439Q8NDP4 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC15.1■□□□□ 0.01
ZNF439Q8NDP4 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC15.1■□□□□ 0.01
ZNF439Q8NDP4 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF439Q8NDP4 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF439Q8NDP4 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF439Q8NDP4 AC135776.1-201ENST00000319817 2481 ntBASIC15.1■□□□□ 0.01
ZNF439Q8NDP4 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF439Q8NDP4 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF439Q8NDP4 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF439Q8NDP4 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC15.1■□□□□ 0.01
ZNF439Q8NDP4 AC093677.2-201ENST00000600169 1863 ntBASIC15.1■□□□□ 0.01
ZNF439Q8NDP4 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
ZNF439Q8NDP4 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
ZNF439Q8NDP4 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC15.09■□□□□ 0.01
ZNF439Q8NDP4 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC15.09■□□□□ 0.01
ZNF439Q8NDP4 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF439Q8NDP4 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF439Q8NDP4 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
ZNF439Q8NDP4 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF439Q8NDP4 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF439Q8NDP4 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC15.09■□□□□ 0.01
ZNF439Q8NDP4 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.09■□□□□ 0.01
ZNF439Q8NDP4 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC15.09■□□□□ 0.01
ZNF439Q8NDP4 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF439Q8NDP4 AL163051.1-201ENST00000569214 1512 ntBASIC15.09■□□□□ 0.01
ZNF439Q8NDP4 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
ZNF439Q8NDP4 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF439Q8NDP4 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF439Q8NDP4 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF439Q8NDP4 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF439Q8NDP4 CRAT-202ENST00000393384 973 ntTSL 2 BASIC15.09■□□□□ 0.01
ZNF439Q8NDP4 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF439Q8NDP4 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC15.09■□□□□ 0.01
ZNF439Q8NDP4 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC15.09■□□□□ 0.01
ZNF439Q8NDP4 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC15.09■□□□□ 0.01
ZNF439Q8NDP4 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC15.09■□□□□ 0.01
ZNF439Q8NDP4 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF439Q8NDP4 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF439Q8NDP4 FAM87A-204ENST00000613235 858 ntBASIC15.09■□□□□ 0.01
ZNF439Q8NDP4 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF439Q8NDP4 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms