Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC89Q8N998 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC89Q8N998 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.93■□□□□ 0.62
CCDC89Q8N998 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC89Q8N998 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC89Q8N998 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC89Q8N998 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.93■□□□□ 0.62
CCDC89Q8N998 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC89Q8N998 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.93■□□□□ 0.62
CCDC89Q8N998 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CCDC89Q8N998 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC89Q8N998 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC89Q8N998 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CCDC89Q8N998 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC89Q8N998 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC89Q8N998 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.93■□□□□ 0.62
CCDC89Q8N998 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC89Q8N998 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.93■□□□□ 0.62
CCDC89Q8N998 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC89Q8N998 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC89Q8N998 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CCDC89Q8N998 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
CCDC89Q8N998 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC89Q8N998 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.93■□□□□ 0.62
CCDC89Q8N998 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CCDC89Q8N998 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC89Q8N998 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC89Q8N998 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC89Q8N998 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CCDC89Q8N998 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC89Q8N998 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC89Q8N998 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC89Q8N998 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC89Q8N998 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC89Q8N998 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC89Q8N998 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CCDC89Q8N998 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC89Q8N998 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.92■□□□□ 0.62
CCDC89Q8N998 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC89Q8N998 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC89Q8N998 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC89Q8N998 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.92■□□□□ 0.62
CCDC89Q8N998 AC099343.3-201ENST00000605834 2503 ntBASIC18.92■□□□□ 0.62
CCDC89Q8N998 PHGDH-209ENST00000641074 1780 ntBASIC18.92■□□□□ 0.62
CCDC89Q8N998 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC89Q8N998 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC89Q8N998 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CCDC89Q8N998 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.92■□□□□ 0.62
CCDC89Q8N998 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.92■□□□□ 0.62
CCDC89Q8N998 AC026471.5-201ENST00000615068 467 ntBASIC18.92■□□□□ 0.62
CCDC89Q8N998 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC89Q8N998 AC036111.1-201ENST00000533973 1582 ntBASIC18.92■□□□□ 0.62
CCDC89Q8N998 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC89Q8N998 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC89Q8N998 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC89Q8N998 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC89Q8N998 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC89Q8N998 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CCDC89Q8N998 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC89Q8N998 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC89Q8N998 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC89Q8N998 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC89Q8N998 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC89Q8N998 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC89Q8N998 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC89Q8N998 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC89Q8N998 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC89Q8N998 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC89Q8N998 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC89Q8N998 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC89Q8N998 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC89Q8N998 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.91■□□□□ 0.62
CCDC89Q8N998 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC89Q8N998 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC89Q8N998 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CCDC89Q8N998 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC89Q8N998 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC89Q8N998 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC89Q8N998 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CCDC89Q8N998 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC89Q8N998 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC89Q8N998 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC89Q8N998 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC89Q8N998 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC89Q8N998 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC89Q8N998 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
CCDC89Q8N998 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC89Q8N998 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC89Q8N998 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.9■□□□□ 0.62
CCDC89Q8N998 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC89Q8N998 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC89Q8N998 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC89Q8N998 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC89Q8N998 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.9■□□□□ 0.62
CCDC89Q8N998 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.9■□□□□ 0.62
CCDC89Q8N998 MIR4674-201ENST00000582457 87 ntBASIC18.9■□□□□ 0.62
CCDC89Q8N998 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC89Q8N998 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC89Q8N998 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CCDC89Q8N998 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms