Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATPAF2Q8N5M1 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
ATPAF2Q8N5M1 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.69■□□□□ 0.58
ATPAF2Q8N5M1 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATPAF2Q8N5M1 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATPAF2Q8N5M1 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATPAF2Q8N5M1 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATPAF2Q8N5M1 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATPAF2Q8N5M1 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATPAF2Q8N5M1 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATPAF2Q8N5M1 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATPAF2Q8N5M1 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATPAF2Q8N5M1 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ATPAF2Q8N5M1 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATPAF2Q8N5M1 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ATPAF2Q8N5M1 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATPAF2Q8N5M1 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATPAF2Q8N5M1 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.68■□□□□ 0.58
ATPAF2Q8N5M1 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATPAF2Q8N5M1 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATPAF2Q8N5M1 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATPAF2Q8N5M1 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
ATPAF2Q8N5M1 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATPAF2Q8N5M1 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATPAF2Q8N5M1 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ATPAF2Q8N5M1 KRT18P38-201ENST00000449496 1282 ntBASIC18.68■□□□□ 0.58
ATPAF2Q8N5M1 DUX4L26-201ENST00000489078 1255 ntBASIC18.68■□□□□ 0.58
ATPAF2Q8N5M1 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ATPAF2Q8N5M1 AC063952.2-201ENST00000498792 1227 ntBASIC18.68■□□□□ 0.58
ATPAF2Q8N5M1 AC022616.7-201ENST00000525383 220 ntBASIC18.68■□□□□ 0.58
ATPAF2Q8N5M1 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.68■□□□□ 0.58
ATPAF2Q8N5M1 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
ATPAF2Q8N5M1 AC079602.3-201ENST00000623931 403 ntBASIC18.68■□□□□ 0.58
ATPAF2Q8N5M1 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATPAF2Q8N5M1 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATPAF2Q8N5M1 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ATPAF2Q8N5M1 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ATPAF2Q8N5M1 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
ATPAF2Q8N5M1 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATPAF2Q8N5M1 AL096828.2-201ENST00000567259 1965 ntBASIC18.68■□□□□ 0.58
ATPAF2Q8N5M1 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
ATPAF2Q8N5M1 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATPAF2Q8N5M1 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATPAF2Q8N5M1 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATPAF2Q8N5M1 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ATPAF2Q8N5M1 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATPAF2Q8N5M1 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATPAF2Q8N5M1 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATPAF2Q8N5M1 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATPAF2Q8N5M1 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATPAF2Q8N5M1 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATPAF2Q8N5M1 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.67■□□□□ 0.58
ATPAF2Q8N5M1 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATPAF2Q8N5M1 AL391807.1-203ENST00000604392 2365 ntBASIC18.67■□□□□ 0.58
ATPAF2Q8N5M1 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.67■□□□□ 0.58
ATPAF2Q8N5M1 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
ATPAF2Q8N5M1 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.67■□□□□ 0.58
ATPAF2Q8N5M1 FAM8A6P-201ENST00000407496 1135 ntBASIC18.67■□□□□ 0.58
ATPAF2Q8N5M1 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATPAF2Q8N5M1 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.67■□□□□ 0.58
ATPAF2Q8N5M1 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ATPAF2Q8N5M1 LINC01238-205ENST00000567549 1107 ntBASIC18.67■□□□□ 0.58
ATPAF2Q8N5M1 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.67■□□□□ 0.58
ATPAF2Q8N5M1 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATPAF2Q8N5M1 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
ATPAF2Q8N5M1 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.67■□□□□ 0.58
ATPAF2Q8N5M1 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATPAF2Q8N5M1 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATPAF2Q8N5M1 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.67■□□□□ 0.58
ATPAF2Q8N5M1 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.67■□□□□ 0.58
ATPAF2Q8N5M1 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATPAF2Q8N5M1 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATPAF2Q8N5M1 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATPAF2Q8N5M1 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATPAF2Q8N5M1 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATPAF2Q8N5M1 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATPAF2Q8N5M1 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.67■□□□□ 0.58
ATPAF2Q8N5M1 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
ATPAF2Q8N5M1 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATPAF2Q8N5M1 REXO1L9P-201ENST00000604264 2108 ntBASIC18.67■□□□□ 0.58
ATPAF2Q8N5M1 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATPAF2Q8N5M1 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATPAF2Q8N5M1 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATPAF2Q8N5M1 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
ATPAF2Q8N5M1 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
ATPAF2Q8N5M1 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATPAF2Q8N5M1 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATPAF2Q8N5M1 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATPAF2Q8N5M1 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATPAF2Q8N5M1 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.66■□□□□ 0.58
ATPAF2Q8N5M1 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.66■□□□□ 0.58
ATPAF2Q8N5M1 FAM210CP-201ENST00000445714 574 ntBASIC18.66■□□□□ 0.58
ATPAF2Q8N5M1 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.66■□□□□ 0.58
ATPAF2Q8N5M1 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.66■□□□□ 0.58
ATPAF2Q8N5M1 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.66■□□□□ 0.58
ATPAF2Q8N5M1 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.66■□□□□ 0.58
ATPAF2Q8N5M1 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.66■□□□□ 0.58
ATPAF2Q8N5M1 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATPAF2Q8N5M1 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATPAF2Q8N5M1 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms