Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.48■□□□□ 0.55
SYNPOQ8N3V7 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.48■□□□□ 0.55
SYNPOQ8N3V7 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.48■□□□□ 0.55
SYNPOQ8N3V7 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.48■□□□□ 0.55
SYNPOQ8N3V7 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SYNPOQ8N3V7 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SYNPOQ8N3V7 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SYNPOQ8N3V7 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SYNPOQ8N3V7 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SYNPOQ8N3V7 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SYNPOQ8N3V7 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SYNPOQ8N3V7 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SYNPOQ8N3V7 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.48■□□□□ 0.55
SYNPOQ8N3V7 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SYNPOQ8N3V7 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SYNPOQ8N3V7 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SYNPOQ8N3V7 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.48■□□□□ 0.55
SYNPOQ8N3V7 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.48■□□□□ 0.55
SYNPOQ8N3V7 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SYNPOQ8N3V7 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.47■□□□□ 0.55
SYNPOQ8N3V7 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
SYNPOQ8N3V7 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SYNPOQ8N3V7 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SYNPOQ8N3V7 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SYNPOQ8N3V7 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.47■□□□□ 0.55
SYNPOQ8N3V7 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
SYNPOQ8N3V7 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SYNPOQ8N3V7 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SYNPOQ8N3V7 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
SYNPOQ8N3V7 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.47■□□□□ 0.55
SYNPOQ8N3V7 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SYNPOQ8N3V7 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SYNPOQ8N3V7 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
SYNPOQ8N3V7 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SYNPOQ8N3V7 AC068472.1-201ENST00000474589 881 ntBASIC18.47■□□□□ 0.55
SYNPOQ8N3V7 AC092865.5-201ENST00000545435 363 ntBASIC18.47■□□□□ 0.55
SYNPOQ8N3V7 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.47■□□□□ 0.55
SYNPOQ8N3V7 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SYNPOQ8N3V7 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.47■□□□□ 0.55
SYNPOQ8N3V7 FAM215A-202ENST00000632077 792 ntBASIC18.47■□□□□ 0.55
SYNPOQ8N3V7 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SYNPOQ8N3V7 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.47■□□□□ 0.55
SYNPOQ8N3V7 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SYNPOQ8N3V7 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SYNPOQ8N3V7 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SYNPOQ8N3V7 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SYNPOQ8N3V7 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
SYNPOQ8N3V7 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SYNPOQ8N3V7 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SYNPOQ8N3V7 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.47■□□□□ 0.55
SYNPOQ8N3V7 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SYNPOQ8N3V7 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SYNPOQ8N3V7 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SYNPOQ8N3V7 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SYNPOQ8N3V7 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SYNPOQ8N3V7 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SYNPOQ8N3V7 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SYNPOQ8N3V7 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SYNPOQ8N3V7 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SYNPOQ8N3V7 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SYNPOQ8N3V7 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SYNPOQ8N3V7 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
SYNPOQ8N3V7 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SYNPOQ8N3V7 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SYNPOQ8N3V7 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SYNPOQ8N3V7 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
SYNPOQ8N3V7 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
SYNPOQ8N3V7 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
SYNPOQ8N3V7 MIR1233-2-201ENST00000408138 82 ntBASIC18.46■□□□□ 0.55
SYNPOQ8N3V7 MIR1233-1-201ENST00000408722 82 ntBASIC18.46■□□□□ 0.55
SYNPOQ8N3V7 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.46■□□□□ 0.55
SYNPOQ8N3V7 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SYNPOQ8N3V7 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.46■□□□□ 0.55
SYNPOQ8N3V7 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.46■□□□□ 0.55
SYNPOQ8N3V7 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.46■□□□□ 0.55
SYNPOQ8N3V7 MTDHP3-201ENST00000594186 672 ntBASIC18.46■□□□□ 0.55
SYNPOQ8N3V7 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
SYNPOQ8N3V7 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
SYNPOQ8N3V7 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.46■□□□□ 0.55
SYNPOQ8N3V7 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SYNPOQ8N3V7 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SYNPOQ8N3V7 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.46■□□□□ 0.54
SYNPOQ8N3V7 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.46■□□□□ 0.54
SYNPOQ8N3V7 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
SYNPOQ8N3V7 AC009102.3-201ENST00000623118 1491 ntBASIC18.46■□□□□ 0.54
SYNPOQ8N3V7 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
SYNPOQ8N3V7 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
SYNPOQ8N3V7 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SYNPOQ8N3V7 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SYNPOQ8N3V7 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SYNPOQ8N3V7 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
SYNPOQ8N3V7 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
SYNPOQ8N3V7 MTMR9LP-203ENST00000426597 1545 ntBASIC18.45■□□□□ 0.54
SYNPOQ8N3V7 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
SYNPOQ8N3V7 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SYNPOQ8N3V7 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.45■□□□□ 0.54
SYNPOQ8N3V7 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SYNPOQ8N3V7 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SYNPOQ8N3V7 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
SYNPOQ8N3V7 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms