Protein–RNA interactions for Protein: Q8IYG6

LRRC56, Leucine-rich repeat-containing protein 56, humanhuman

Predicted RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC56Q8IYG6 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
LRRC56Q8IYG6 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
LRRC56Q8IYG6 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC56Q8IYG6 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC56Q8IYG6 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC56Q8IYG6 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC56Q8IYG6 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC56Q8IYG6 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
LRRC56Q8IYG6 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC56Q8IYG6 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC56Q8IYG6 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC56Q8IYG6 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.56■□□□□ 0.4
LRRC56Q8IYG6 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC56Q8IYG6 AL136038.3-201ENST00000561909 1096 ntBASIC17.56■□□□□ 0.4
LRRC56Q8IYG6 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
LRRC56Q8IYG6 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
LRRC56Q8IYG6 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.56■□□□□ 0.4
LRRC56Q8IYG6 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.56■□□□□ 0.4
LRRC56Q8IYG6 AL590326.2-201ENST00000625139 305 ntBASIC17.56■□□□□ 0.4
LRRC56Q8IYG6 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC56Q8IYG6 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC56Q8IYG6 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC56Q8IYG6 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC56Q8IYG6 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
LRRC56Q8IYG6 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC56Q8IYG6 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.56■□□□□ 0.4
LRRC56Q8IYG6 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
LRRC56Q8IYG6 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC56Q8IYG6 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC56Q8IYG6 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC56Q8IYG6 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC56Q8IYG6 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC56Q8IYG6 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC56Q8IYG6 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC56Q8IYG6 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC56Q8IYG6 NOC2LP1-202ENST00000452600 2235 ntBASIC17.55■□□□□ 0.4
LRRC56Q8IYG6 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC56Q8IYG6 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC56Q8IYG6 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC56Q8IYG6 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC56Q8IYG6 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.55■□□□□ 0.4
LRRC56Q8IYG6 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC56Q8IYG6 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC56Q8IYG6 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC56Q8IYG6 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.55■□□□□ 0.4
LRRC56Q8IYG6 IGHGP-201ENST00000390555 1178 ntBASIC17.55■□□□□ 0.4
LRRC56Q8IYG6 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC56Q8IYG6 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC56Q8IYG6 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.55■□□□□ 0.4
LRRC56Q8IYG6 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.55■□□□□ 0.4
LRRC56Q8IYG6 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC56Q8IYG6 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC56Q8IYG6 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.55■□□□□ 0.4
LRRC56Q8IYG6 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC56Q8IYG6 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.55■□□□□ 0.4
LRRC56Q8IYG6 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC56Q8IYG6 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC56Q8IYG6 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC56Q8IYG6 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.55■□□□□ 0.4
LRRC56Q8IYG6 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC56Q8IYG6 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC56Q8IYG6 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC56Q8IYG6 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
LRRC56Q8IYG6 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC56Q8IYG6 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC56Q8IYG6 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC56Q8IYG6 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC56Q8IYG6 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC56Q8IYG6 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC56Q8IYG6 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
LRRC56Q8IYG6 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.54■□□□□ 0.4
LRRC56Q8IYG6 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.54■□□□□ 0.4
LRRC56Q8IYG6 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.54■□□□□ 0.4
LRRC56Q8IYG6 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.54■□□□□ 0.4
LRRC56Q8IYG6 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.54■□□□□ 0.4
LRRC56Q8IYG6 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.54■□□□□ 0.4
LRRC56Q8IYG6 RNF126P1-202ENST00000569893 925 ntBASIC17.54■□□□□ 0.4
LRRC56Q8IYG6 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.54■□□□□ 0.4
LRRC56Q8IYG6 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.54■□□□□ 0.4
LRRC56Q8IYG6 AL121956.5-201ENST00000625261 221 ntBASIC17.54■□□□□ 0.4
LRRC56Q8IYG6 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.54■□□□□ 0.4
LRRC56Q8IYG6 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
LRRC56Q8IYG6 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC56Q8IYG6 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC56Q8IYG6 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
LRRC56Q8IYG6 AC138028.4-201ENST00000564984 1845 ntBASIC17.54■□□□□ 0.4
LRRC56Q8IYG6 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.54■□□□□ 0.4
LRRC56Q8IYG6 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC56Q8IYG6 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC56Q8IYG6 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC56Q8IYG6 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC56Q8IYG6 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC56Q8IYG6 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC56Q8IYG6 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
LRRC56Q8IYG6 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC56Q8IYG6 AIRN-201ENST00000601203 4374 ntBASIC17.53■□□□□ 0.4
LRRC56Q8IYG6 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC56Q8IYG6 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
LRRC56Q8IYG6 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC56Q8IYG6 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms