Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF111Q6ZNA4 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.71■□□□□ 0.43
RNF111Q6ZNA4 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RNF111Q6ZNA4 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.71■□□□□ 0.43
RNF111Q6ZNA4 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.71■□□□□ 0.43
RNF111Q6ZNA4 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.71■□□□□ 0.43
RNF111Q6ZNA4 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RNF111Q6ZNA4 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
RNF111Q6ZNA4 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.71■□□□□ 0.43
RNF111Q6ZNA4 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF111Q6ZNA4 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF111Q6ZNA4 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF111Q6ZNA4 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.71■□□□□ 0.43
RNF111Q6ZNA4 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.71■□□□□ 0.43
RNF111Q6ZNA4 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF111Q6ZNA4 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF111Q6ZNA4 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.71■□□□□ 0.43
RNF111Q6ZNA4 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.42
RNF111Q6ZNA4 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF111Q6ZNA4 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF111Q6ZNA4 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF111Q6ZNA4 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF111Q6ZNA4 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF111Q6ZNA4 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
RNF111Q6ZNA4 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RNF111Q6ZNA4 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF111Q6ZNA4 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF111Q6ZNA4 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF111Q6ZNA4 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF111Q6ZNA4 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
RNF111Q6ZNA4 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RNF111Q6ZNA4 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF111Q6ZNA4 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF111Q6ZNA4 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.7■□□□□ 0.42
RNF111Q6ZNA4 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.7■□□□□ 0.42
RNF111Q6ZNA4 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF111Q6ZNA4 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF111Q6ZNA4 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF111Q6ZNA4 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF111Q6ZNA4 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF111Q6ZNA4 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF111Q6ZNA4 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.7■□□□□ 0.42
RNF111Q6ZNA4 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.7■□□□□ 0.42
RNF111Q6ZNA4 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.7■□□□□ 0.42
RNF111Q6ZNA4 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF111Q6ZNA4 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF111Q6ZNA4 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF111Q6ZNA4 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.7■□□□□ 0.42
RNF111Q6ZNA4 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF111Q6ZNA4 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF111Q6ZNA4 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF111Q6ZNA4 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
RNF111Q6ZNA4 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
RNF111Q6ZNA4 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF111Q6ZNA4 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF111Q6ZNA4 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF111Q6ZNA4 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF111Q6ZNA4 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF111Q6ZNA4 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RNF111Q6ZNA4 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF111Q6ZNA4 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF111Q6ZNA4 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.69■□□□□ 0.42
RNF111Q6ZNA4 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF111Q6ZNA4 C2orf69P3-201ENST00000565542 1120 ntBASIC17.69■□□□□ 0.42
RNF111Q6ZNA4 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.69■□□□□ 0.42
RNF111Q6ZNA4 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
RNF111Q6ZNA4 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
RNF111Q6ZNA4 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF111Q6ZNA4 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF111Q6ZNA4 REXO1L9P-201ENST00000604264 2108 ntBASIC17.69■□□□□ 0.42
RNF111Q6ZNA4 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF111Q6ZNA4 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF111Q6ZNA4 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF111Q6ZNA4 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF111Q6ZNA4 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF111Q6ZNA4 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.69■□□□□ 0.42
RNF111Q6ZNA4 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF111Q6ZNA4 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF111Q6ZNA4 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RNF111Q6ZNA4 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF111Q6ZNA4 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF111Q6ZNA4 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF111Q6ZNA4 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RNF111Q6ZNA4 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF111Q6ZNA4 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF111Q6ZNA4 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF111Q6ZNA4 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF111Q6ZNA4 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF111Q6ZNA4 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF111Q6ZNA4 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF111Q6ZNA4 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF111Q6ZNA4 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.68■□□□□ 0.42
RNF111Q6ZNA4 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF111Q6ZNA4 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.68■□□□□ 0.42
RNF111Q6ZNA4 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.68■□□□□ 0.42
RNF111Q6ZNA4 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF111Q6ZNA4 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.68■□□□□ 0.42
RNF111Q6ZNA4 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.68■□□□□ 0.42
RNF111Q6ZNA4 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF111Q6ZNA4 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms