Protein–RNA interactions for Protein: Q6W3E5

GDPD4, Glycerophosphodiester phosphodiesterase domain-containing protein 4, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD4Q6W3E5 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.24■□□□□ 0.51
GDPD4Q6W3E5 AC009154.2-201ENST00000621177 724 ntBASIC18.24■□□□□ 0.51
GDPD4Q6W3E5 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GDPD4Q6W3E5 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.24■□□□□ 0.51
GDPD4Q6W3E5 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.24■□□□□ 0.51
GDPD4Q6W3E5 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.24■□□□□ 0.51
GDPD4Q6W3E5 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.24■□□□□ 0.51
GDPD4Q6W3E5 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
GDPD4Q6W3E5 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.24■□□□□ 0.51
GDPD4Q6W3E5 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.24■□□□□ 0.51
GDPD4Q6W3E5 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GDPD4Q6W3E5 LINC00167-201ENST00000530583 1419 ntBASIC18.23■□□□□ 0.51
GDPD4Q6W3E5 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
GDPD4Q6W3E5 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
GDPD4Q6W3E5 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
GDPD4Q6W3E5 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GDPD4Q6W3E5 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.23■□□□□ 0.51
GDPD4Q6W3E5 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
GDPD4Q6W3E5 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.23■□□□□ 0.51
GDPD4Q6W3E5 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
GDPD4Q6W3E5 PHGDH-209ENST00000641074 1780 ntBASIC18.23■□□□□ 0.51
GDPD4Q6W3E5 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
GDPD4Q6W3E5 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
GDPD4Q6W3E5 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GDPD4Q6W3E5 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.23■□□□□ 0.51
GDPD4Q6W3E5 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.23■□□□□ 0.51
GDPD4Q6W3E5 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
GDPD4Q6W3E5 AC011840.4-201ENST00000578471 627 ntBASIC18.23■□□□□ 0.51
GDPD4Q6W3E5 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GDPD4Q6W3E5 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
GDPD4Q6W3E5 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
GDPD4Q6W3E5 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
GDPD4Q6W3E5 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.23■□□□□ 0.51
GDPD4Q6W3E5 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GDPD4Q6W3E5 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GDPD4Q6W3E5 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GDPD4Q6W3E5 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
GDPD4Q6W3E5 AC233702.3-201ENST00000578656 1387 ntBASIC18.22■□□□□ 0.51
GDPD4Q6W3E5 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.22■□□□□ 0.51
GDPD4Q6W3E5 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GDPD4Q6W3E5 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
GDPD4Q6W3E5 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GDPD4Q6W3E5 KRT18P65-201ENST00000439811 1286 ntBASIC18.22■□□□□ 0.51
GDPD4Q6W3E5 VENTXP7-201ENST00000475503 772 ntBASIC18.22■□□□□ 0.51
GDPD4Q6W3E5 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
GDPD4Q6W3E5 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.22■□□□□ 0.51
GDPD4Q6W3E5 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GDPD4Q6W3E5 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.22■□□□□ 0.51
GDPD4Q6W3E5 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GDPD4Q6W3E5 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.22■□□□□ 0.51
GDPD4Q6W3E5 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.22■□□□□ 0.51
GDPD4Q6W3E5 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
GDPD4Q6W3E5 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GDPD4Q6W3E5 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GDPD4Q6W3E5 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
GDPD4Q6W3E5 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
GDPD4Q6W3E5 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
GDPD4Q6W3E5 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
GDPD4Q6W3E5 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
GDPD4Q6W3E5 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
GDPD4Q6W3E5 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GDPD4Q6W3E5 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GDPD4Q6W3E5 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GDPD4Q6W3E5 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GDPD4Q6W3E5 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
GDPD4Q6W3E5 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
GDPD4Q6W3E5 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.21■□□□□ 0.51
GDPD4Q6W3E5 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GDPD4Q6W3E5 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GDPD4Q6W3E5 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
GDPD4Q6W3E5 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
GDPD4Q6W3E5 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
GDPD4Q6W3E5 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GDPD4Q6W3E5 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
GDPD4Q6W3E5 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.21■□□□□ 0.51
GDPD4Q6W3E5 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GDPD4Q6W3E5 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GDPD4Q6W3E5 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GDPD4Q6W3E5 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
GDPD4Q6W3E5 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.21■□□□□ 0.51
GDPD4Q6W3E5 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
GDPD4Q6W3E5 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
GDPD4Q6W3E5 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
GDPD4Q6W3E5 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.21■□□□□ 0.51
GDPD4Q6W3E5 AC068472.1-201ENST00000474589 881 ntBASIC18.21■□□□□ 0.51
GDPD4Q6W3E5 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.21■□□□□ 0.51
GDPD4Q6W3E5 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.21■□□□□ 0.51
GDPD4Q6W3E5 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.21■□□□□ 0.51
GDPD4Q6W3E5 Z69720.1-201ENST00000601483 472 ntBASIC18.21■□□□□ 0.51
GDPD4Q6W3E5 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
GDPD4Q6W3E5 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GDPD4Q6W3E5 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.21■□□□□ 0.51
GDPD4Q6W3E5 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
GDPD4Q6W3E5 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
GDPD4Q6W3E5 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
GDPD4Q6W3E5 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.21■□□□□ 0.51
GDPD4Q6W3E5 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GDPD4Q6W3E5 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
GDPD4Q6W3E5 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GDPD4Q6W3E5 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms