Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC15.9■□□□□ 0.14
C11orf88Q6PI97 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC15.9■□□□□ 0.14
C11orf88Q6PI97 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
C11orf88Q6PI97 AC110285.5-201ENST00000611501 352 ntBASIC15.9■□□□□ 0.14
C11orf88Q6PI97 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
C11orf88Q6PI97 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
C11orf88Q6PI97 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
C11orf88Q6PI97 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
C11orf88Q6PI97 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.9■□□□□ 0.14
C11orf88Q6PI97 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
C11orf88Q6PI97 KRT17P2-201ENST00000300992 1314 ntBASIC15.9■□□□□ 0.14
C11orf88Q6PI97 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
C11orf88Q6PI97 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
C11orf88Q6PI97 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
C11orf88Q6PI97 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
C11orf88Q6PI97 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
C11orf88Q6PI97 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.9■□□□□ 0.14
C11orf88Q6PI97 AC124067.4-201ENST00000519691 2379 ntBASIC15.9■□□□□ 0.14
C11orf88Q6PI97 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
C11orf88Q6PI97 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.14
C11orf88Q6PI97 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
C11orf88Q6PI97 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
C11orf88Q6PI97 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
C11orf88Q6PI97 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC15.89■□□□□ 0.13
C11orf88Q6PI97 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
C11orf88Q6PI97 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
C11orf88Q6PI97 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
C11orf88Q6PI97 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
C11orf88Q6PI97 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
C11orf88Q6PI97 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
C11orf88Q6PI97 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC15.89■□□□□ 0.13
C11orf88Q6PI97 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC15.89■□□□□ 0.13
C11orf88Q6PI97 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
C11orf88Q6PI97 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
C11orf88Q6PI97 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
C11orf88Q6PI97 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC15.89■□□□□ 0.13
C11orf88Q6PI97 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
C11orf88Q6PI97 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
C11orf88Q6PI97 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
C11orf88Q6PI97 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
C11orf88Q6PI97 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC15.89■□□□□ 0.13
C11orf88Q6PI97 HES2-206ENST00000489730 730 ntTSL 2 BASIC15.89■□□□□ 0.13
C11orf88Q6PI97 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC15.89■□□□□ 0.13
C11orf88Q6PI97 LY6E-205ENST00000519611 635 ntTSL 3 BASIC15.89■□□□□ 0.13
C11orf88Q6PI97 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
C11orf88Q6PI97 KLF2-202ENST00000592003 564 ntTSL 3 BASIC15.89■□□□□ 0.13
C11orf88Q6PI97 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
C11orf88Q6PI97 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC15.89■□□□□ 0.13
C11orf88Q6PI97 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
C11orf88Q6PI97 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
C11orf88Q6PI97 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
C11orf88Q6PI97 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
C11orf88Q6PI97 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
C11orf88Q6PI97 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
C11orf88Q6PI97 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
C11orf88Q6PI97 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC15.89■□□□□ 0.13
C11orf88Q6PI97 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
C11orf88Q6PI97 AC084018.2-201ENST00000613093 2607 ntBASIC15.89■□□□□ 0.13
C11orf88Q6PI97 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
C11orf88Q6PI97 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC15.89■□□□□ 0.13
C11orf88Q6PI97 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
C11orf88Q6PI97 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
C11orf88Q6PI97 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
C11orf88Q6PI97 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC15.89■□□□□ 0.13
C11orf88Q6PI97 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
C11orf88Q6PI97 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
C11orf88Q6PI97 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
C11orf88Q6PI97 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
C11orf88Q6PI97 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
C11orf88Q6PI97 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC15.88■□□□□ 0.13
C11orf88Q6PI97 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC15.88■□□□□ 0.13
C11orf88Q6PI97 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
C11orf88Q6PI97 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC15.88■□□□□ 0.13
C11orf88Q6PI97 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC15.88■□□□□ 0.13
C11orf88Q6PI97 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
C11orf88Q6PI97 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.88■□□□□ 0.13
C11orf88Q6PI97 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
C11orf88Q6PI97 ANKRD18DP-204ENST00000455355 1975 ntBASIC15.88■□□□□ 0.13
C11orf88Q6PI97 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
C11orf88Q6PI97 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
C11orf88Q6PI97 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
C11orf88Q6PI97 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
C11orf88Q6PI97 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC15.88■□□□□ 0.13
C11orf88Q6PI97 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
C11orf88Q6PI97 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC15.88■□□□□ 0.13
C11orf88Q6PI97 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC15.88■□□□□ 0.13
C11orf88Q6PI97 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC15.88■□□□□ 0.13
C11orf88Q6PI97 AC233263.1-201ENST00000578059 224 ntBASIC15.88■□□□□ 0.13
C11orf88Q6PI97 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC15.88■□□□□ 0.13
C11orf88Q6PI97 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC15.88■□□□□ 0.13
C11orf88Q6PI97 AC233702.5-201ENST00000584107 538 ntBASIC15.88■□□□□ 0.13
C11orf88Q6PI97 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC15.88■□□□□ 0.13
C11orf88Q6PI97 AC124016.1-201ENST00000609552 612 ntBASIC15.88■□□□□ 0.13
C11orf88Q6PI97 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
C11orf88Q6PI97 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
C11orf88Q6PI97 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.88■□□□□ 0.13
C11orf88Q6PI97 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC15.88■□□□□ 0.13
C11orf88Q6PI97 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
C11orf88Q6PI97 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
C11orf88Q6PI97 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms