Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 AC004967.1-201ENST00000453589 447 ntBASIC19.54■□□□□ 0.72
CNKSR3Q6P9H4 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.54■□□□□ 0.72
CNKSR3Q6P9H4 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC19.54■□□□□ 0.72
CNKSR3Q6P9H4 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CNKSR3Q6P9H4 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.54■□□□□ 0.72
CNKSR3Q6P9H4 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.54■□□□□ 0.72
CNKSR3Q6P9H4 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CNKSR3Q6P9H4 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CNKSR3Q6P9H4 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC19.53■□□□□ 0.72
CNKSR3Q6P9H4 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
CNKSR3Q6P9H4 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNKSR3Q6P9H4 AC007952.6-201ENST00000573168 2673 ntBASIC19.53■□□□□ 0.72
CNKSR3Q6P9H4 AC003957.1-201ENST00000625108 2673 ntBASIC19.53■□□□□ 0.72
CNKSR3Q6P9H4 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNKSR3Q6P9H4 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.53■□□□□ 0.72
CNKSR3Q6P9H4 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CNKSR3Q6P9H4 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNKSR3Q6P9H4 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNKSR3Q6P9H4 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNKSR3Q6P9H4 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CNKSR3Q6P9H4 AC007967.2-201ENST00000432613 625 ntBASIC19.53■□□□□ 0.72
CNKSR3Q6P9H4 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC19.53■□□□□ 0.72
CNKSR3Q6P9H4 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CNKSR3Q6P9H4 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNKSR3Q6P9H4 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CNKSR3Q6P9H4 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.53■□□□□ 0.72
CNKSR3Q6P9H4 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CNKSR3Q6P9H4 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CNKSR3Q6P9H4 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.52■□□□□ 0.72
CNKSR3Q6P9H4 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CNKSR3Q6P9H4 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.52■□□□□ 0.72
CNKSR3Q6P9H4 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.52■□□□□ 0.72
CNKSR3Q6P9H4 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CNKSR3Q6P9H4 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CNKSR3Q6P9H4 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.52■□□□□ 0.72
CNKSR3Q6P9H4 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CNKSR3Q6P9H4 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.52■□□□□ 0.72
CNKSR3Q6P9H4 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.52■□□□□ 0.72
CNKSR3Q6P9H4 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.52■□□□□ 0.72
CNKSR3Q6P9H4 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CNKSR3Q6P9H4 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC19.52■□□□□ 0.72
CNKSR3Q6P9H4 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.52■□□□□ 0.72
CNKSR3Q6P9H4 CRCP-205ENST00000431089 942 ntTSL 2 BASIC19.52■□□□□ 0.72
CNKSR3Q6P9H4 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19.52■□□□□ 0.72
CNKSR3Q6P9H4 AC009947.1-201ENST00000444350 727 ntBASIC19.52■□□□□ 0.72
CNKSR3Q6P9H4 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CNKSR3Q6P9H4 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC19.52■□□□□ 0.72
CNKSR3Q6P9H4 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC19.52■□□□□ 0.72
CNKSR3Q6P9H4 AC002347.1-201ENST00000569543 541 ntBASIC19.52■□□□□ 0.72
CNKSR3Q6P9H4 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC19.52■□□□□ 0.72
CNKSR3Q6P9H4 AL355385.1-201ENST00000606123 409 ntBASIC19.52■□□□□ 0.72
CNKSR3Q6P9H4 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC19.52■□□□□ 0.72
CNKSR3Q6P9H4 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC19.52■□□□□ 0.72
CNKSR3Q6P9H4 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CNKSR3Q6P9H4 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CNKSR3Q6P9H4 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CNKSR3Q6P9H4 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CNKSR3Q6P9H4 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.71
CNKSR3Q6P9H4 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
CNKSR3Q6P9H4 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CNKSR3Q6P9H4 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.52■□□□□ 0.71
CNKSR3Q6P9H4 AL049812.1-201ENST00000432563 2267 ntBASIC19.51■□□□□ 0.71
CNKSR3Q6P9H4 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CNKSR3Q6P9H4 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.51■□□□□ 0.71
CNKSR3Q6P9H4 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CNKSR3Q6P9H4 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.51■□□□□ 0.71
CNKSR3Q6P9H4 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CNKSR3Q6P9H4 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
CNKSR3Q6P9H4 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.51■□□□□ 0.71
CNKSR3Q6P9H4 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.51■□□□□ 0.71
CNKSR3Q6P9H4 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC19.51■□□□□ 0.71
CNKSR3Q6P9H4 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CNKSR3Q6P9H4 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.51■□□□□ 0.71
CNKSR3Q6P9H4 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CNKSR3Q6P9H4 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CNKSR3Q6P9H4 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CNKSR3Q6P9H4 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CNKSR3Q6P9H4 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CNKSR3Q6P9H4 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CNKSR3Q6P9H4 AC079776.2-201ENST00000641154 1609 ntBASIC19.51■□□□□ 0.71
CNKSR3Q6P9H4 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.51■□□□□ 0.71
CNKSR3Q6P9H4 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.51■□□□□ 0.71
CNKSR3Q6P9H4 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CNKSR3Q6P9H4 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.5■□□□□ 0.71
CNKSR3Q6P9H4 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
CNKSR3Q6P9H4 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CNKSR3Q6P9H4 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CNKSR3Q6P9H4 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CNKSR3Q6P9H4 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC19.5■□□□□ 0.71
CNKSR3Q6P9H4 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CNKSR3Q6P9H4 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
CNKSR3Q6P9H4 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CNKSR3Q6P9H4 AC007967.3-201ENST00000434308 558 ntBASIC19.5■□□□□ 0.71
CNKSR3Q6P9H4 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CNKSR3Q6P9H4 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CNKSR3Q6P9H4 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CNKSR3Q6P9H4 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.5■□□□□ 0.71
CNKSR3Q6P9H4 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
CNKSR3Q6P9H4 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CNKSR3Q6P9H4 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms